Ochotona princeps (American pika): 101517564
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Entry
101517564 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04080
Neuroactive ligand-receptor interaction
opi04082
Neuroactive ligand signaling
opi04723
Retrograde endocannabinoid signaling
opi04727
GABAergic synapse
opi04742
Taste transduction
opi05032
Morphine addiction
opi05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101517564
04082 Neuroactive ligand signaling
101517564
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101517564
04723 Retrograde endocannabinoid signaling
101517564
09157 Sensory system
04742 Taste transduction
101517564
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
101517564
05033 Nicotine addiction
101517564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101517564
Ion channels [BR:
opi04040
]
Ligand-gated channels
GABA-A
101517564
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF4887
Motif
Other DBs
NCBI-GeneID:
101517564
NCBI-ProteinID:
XP_036349955
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All DBs
Position
1:92142186..92146724
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AA seq
463 aa
AA seq
DB search
MDNRMFSSFIMIKNLLLFCISMNXSSHLGFSQMPTISVKDETNDNITIFTRILDGLLDGY
DNRLRPXXXXXXXXXXTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPL
NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKVLRLEDDGTLLYTMRLTISAECPMQLEDF
PMNAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENMNTS
TGEYTIMTAHFHLKRKIRYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISAQNSLPKVAYATAMDWFIAVCHAFVFSALIEFATVNYFTKRGWAWDGKKALEAA
KIKKKERELILNKSTNAFTTGNMTQPPXIPKEQTPAEISNPSSASTKGSEEKTSESKKTY
NSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagaatgttctctagctttatcatgatcaaaaacctccttcttttttgtatc
tccatgaactaatccagtcacttgggcttttcacaaatgccaactatttctgtgaaagat
gagactaatgacaatatcacgatatttacgagaatactggatgggcttttggatggctat
gacaacagactgcgcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggaccgacatctac
gtcaccagctttggcccggtgtcggataccgaaatggaatacaccatcgacgtgtttttc
cgccaaagctggaaagatgaaaggcttcggtttaaggggcccatgcagcgcctcccactc
aacaacctccttgccagcaaaatctggacgccagacacgttcttccacaacgggaagaag
tccattgcgcacaacatgaccacgcccaacaaggtgctgcggctggaggacgacggcacg
ctgctctacacgatgcgcttgactatctctgctgagtgtcccatgcaacttgaagacttc
ccaatgaatgcccatgcttgccctctgaaattcggcagctatgcataccctaattctgag
gttgtgtatgtctggaccaacggctccaccaagtctgtggtggtggcagaagatggctcc
agattgaaccagtatcacttgatgggacagacagtgggcacggagaacatgaacaccagc
acaggtgaatacacaatcatgacagctcatttccacctgaaaaggaagatccggtacttt
gtcatccagacctaccttccctgcataatgactgtgatcttatctcaggtgtccttctgg
ttgaaccgagaatcagttcctgccaggacagtttttggagtaaccacagtgttgaccatg
acgactctgagcatcagtgctcagaactctctgcccaaggtggcttatgcaaccgccatg
gactggttcatcgccgtgtgccatgcttttgtgttctctgcactcatcgagtttgccacg
gtcaactattttacaaagagaggctgggcatgggatggcaaaaaagccttggaagcagcc
aagatcaagaaaaaggagcgtgaactcatactaaataaatccacaaatgcttttactact
ggaaacatgacccagcccccanacatcccaaaggagcagacccctgcagaaatctcaaac
ccatcctcagcctcaacaaaaggttctgaggagaagacttccgagagcaagaagacttac
aacagcattagcaagattgacaaaatgtcccgcattgtattcccagtcttgtttggcact
ttcaacctggtttactgggcaacgtatttgaatagggagcctgtgattaaaggggctgcc
tctccaaagtaa
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