Ochotona princeps (American pika): 101517872
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Entry
101517872 CDS
T07609
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
opi04714
Thermogenesis
opi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101517872 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101517872 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101517872 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101517872 (SMARCD1)
03036 Chromosome and associated proteins [BR:
opi03036
]
101517872 (SMARCD1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101517872 (SMARCD1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101517872 (SMARCD1)
PBAF complex
101517872 (SMARCD1)
GBAF(ncBAF) complex
101517872 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
101517872
NCBI-ProteinID:
XP_004599057
LinkDB
All DBs
Position
4:complement(55397593..55410582)
Genome browser
AA seq
289 aa
AA seq
DB search
MGPWCCRPQARSPPPPQPRQPSSAIPYQTRLWHRTATTQETDGFQVKRPGDVNVRCTVLL
MLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQI
FESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNS
FLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTM
TDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggggccctggtgctgtaggccacaggctcgctcacccccacctccccaaccccggcag
ccctcctcagccatcccctaccagacccggctgtggcacaggaccgccaccacccaggag
acggacggcttccaggtgaagcggccaggcgatgtgaacgtacgatgtacggttttgctg
atgctggactatcagcctccccagtttaaattggatcctcgcctggctcggctcttgggc
atccacacccagactcgtccagtgatcatccaagcactatggcagtatattaagacacac
aaactccaggaccctcacgagcgggagtttgtcatctgtgacaagtacctccaacagatc
tttgagtctcaacgcatgaagttttcggagatccctcagcggctccatgcgttgctcatg
ccaccggaacccatcatcattaatcacgtcatcagtgttgacccaaatgatcagaaaaag
acagcctgttacgacattgatgtggaggtggatgataccttgaagacacagatgaattct
ttcctgctgtcgaccgccagtcagcaggagatagcaactctggacaacaagatccatgag
acgatagaaaccatcaaccagctgaagacgcagcgggagttcatgctgagctttgccaga
gaccctcaggggttcatcaatgactggctgcagtcccagtgccgggacctcaagaccatg
actgatgtggtggggaacccggaggaggagcgccgtgccgagttctacttccagccctgg
gctcaagaggccgtgtgccgctacttctactccaaggtgcagcagcggcgacaagaatta
gagcaagccttgggaatccgaaatacatag
DBGET
integrated database retrieval system
