KEGG   Ochotona princeps (American pika): 101517888
Entry
101517888         CDS       T07609                                 
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
  KO
K16482  centriolar protein POC1
Organism
opi  Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:opi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:opi03036]
    101517888 (POC1A)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:opi03037]
    101517888 (POC1A)
Chromosome and associated proteins [BR:opi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    101517888 (POC1A)
Cilium and associated proteins [BR:opi03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   101517888 (POC1A)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N eIF2A Ge1_WD40 Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_IFT122_2nd WD_LRWD1 TrbK
Other DBs
NCBI-GeneID: 101517888
NCBI-ProteinID: XP_004581576
LinkDB
Position
9A:complement(19429483..19491960)
AA seq 407 aa
MAAPSLEDPSLERHFKGHRDAVTCVDFNLSTKQLASGSMDSCLMVWHMKPQSRAYRFSGH
KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGDSTVFRAHTATVRSVHFCSDGQSLVT
ASDDKTVKVWSTHRQRFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKSSRECV
HSYCEHGSFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNSLSFHPT
GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPVTTVAFSRTGEYFASGGSDEQVMVWKS
NFDVAAYGEAIKVQKPLATLANSARTLPEEDFRLPSAAGRSLESVQSQPQEPSSLPQALT
STLEHIVSQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMHRTTP
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggccgcgcccagcctggaggacccctcgctggagaggcattttaagggccaccgagat
gcagttacctgtgtcgacttcaacctcagtacaaagcagctggccagtggctccatggac
tcatgcctcatggtctggcacatgaagccccagtcacgggcctaccgcttctccggccac
aaggatgctgtcacctgcgtcaacttctctccctcgggacacctgcttgcttcaggctcc
cgtgacaagaccgttcgaatctgggtacccaatgtcaaaggggattcgactgtgttccgt
gcgcacacggccacagtgaggagtgtccacttctgcagtgacggccagtctcttgtgacg
gcctctgacgacaagactgtcaaggtgtggtcaactcatcgccagaggttcctgttctcc
ctgagccagcacatcaactgggtccgctgtgccaggttctcccccgatgggcgactcatc
gtgtctgccagtgatgacaagactgtcaagctgtgggacaaaagcagccgggaatgtgtc
cactcgtactgtgagcatggcagctttgtcacctacgtggacttccatcccagtggtacc
tgcattgctgcggccggcatggacaacacagtgaaggtgtgggatgtacggacccaccgg
ctgttacagcactatcagttgcacagtgcggccgtgaactccctctccttccaccccacg
ggaaactacctgatcacagcatccagcgactcgaccctgaagatcctggacctgatggag
ggccgattgctctacacactgcacgggcatcagggtcctgtcaccactgttgccttttca
agaactggggaatattttgcttctggaggttctgatgagcaggtgatggtttggaagagt
aactttgacgttgctgcctatggagaagccatcaaagtgcagaagcccctagccacgctg
gccaactctgccaggactctgccagaagaggatttccgcctgccatcagctgcaggcagg
agtctggagtcggtgcagagccagccacaggagcccagcagcctgccccaggcgctgacc
agcaccctggagcacatcgtgagccagctggatgtcctcacccagacggtctccatcctg
gagcagcggctgacgctgacggaagacaagctgaagcagtgtctggagaaccagcagcta
atcatgcacagaacaacaccgtga

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