Ochotona princeps (American pika): 101517963
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Entry
101517963 CDS
T07609
Symbol
NTRK2
Name
(RefSeq) BDNF/NT-3 growth factors receptor isoform X3
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04010
MAPK signaling pathway
opi04014
Ras signaling pathway
opi04020
Calcium signaling pathway
opi04151
PI3K-Akt signaling pathway
opi04722
Neurotrophin signaling pathway
opi05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101517963 (NTRK2)
04014 Ras signaling pathway
101517963 (NTRK2)
04020 Calcium signaling pathway
101517963 (NTRK2)
04151 PI3K-Akt signaling pathway
101517963 (NTRK2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
101517963 (NTRK2)
09160 Human Diseases
09165 Substance dependence
05034 Alcoholism
101517963 (NTRK2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
opi01001
]
101517963 (NTRK2)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
101517963 (NTRK2)
Protein kinases [BR:
opi01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
101517963 (NTRK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
ig
Ig_2
LRR_8
LRRNT
V-set
LRR_5
Haspin_kinase
Ig_C17orf99
C2-set_3
Motif
Other DBs
NCBI-GeneID:
101517963
NCBI-ProteinID:
XP_004581177
LinkDB
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Position
1A:complement(58628550..58986306)
Genome browser
AA seq
838 aa
AA seq
DB search
MSSWTRWHGPAMARLWGFCWLAVGFWRAAVACPTSCKCSASRIWCSDPSPGIVAFPRLEP
ASADPENITEIFIANQKRLEIINEDDVEAYVGLKNLTIVDSGLKFVAYKAFLKNSNLQHI
NFTRNKLTSLSRKHFRHLDLAELILVGNPFTCSCDIVWIKTLQEAKSSPDTQDLYCLNES
SKNIPLANLQIPNCGLPSASLAASNLTVEEGKSITLSCSVTGDPVPNLYWDVGNLVSKHM
NETSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHH
WCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYT
LIAKNEYGKDERQISAHFMGWPGTEEDANLMYPDVIYTDYGTAANDIGDTTNRSSEIPPT
GIIDDTGREHLSVYAVVVIASVVGFCLVVMLFLLKLARHSKFGMKDFSWFGFGKVKSRQG
VGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPVIENPQYFGITNSQL
KPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD
FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGTP
PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST
DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE
CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKSIKGIHTLLQNLAKASPVYLDILG
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctggacgaggtggcatggacccgccatggcgcggctctggggcttctgctgg
ctggcggtgggcttctggagggccgctgtagcctgtcccacgtcttgcaaatgtagtgcc
tctcggatctggtgcagcgacccttctcccggcatcgtggcgtttcccaggttggagcct
gccagtgcagatcctgagaacattaccgaaatcttcattgcaaatcagaaaaggttagaa
atcatcaatgaggatgatgttgaggcttacgtgggactgaaaaatctgactattgtggat
tccggtttaaaatttgtggcttacaaggcgtttctgaaaaacagcaacctgcagcatata
aattttacccgaaataagctgacaagtttatctagaaaacatttccgtcaccttgactta
gctgagctgatcctggtgggcaatccgtttacgtgctcctgtgacattgtgtggatcaag
actctccaagaggccaaatccagtccagacactcaggatttgtactgcctgaatgaaagc
agcaagaatattcccctggcaaacctgcagatacccaattgtggtttgccgtctgccagt
ttggctgcatccaatctcactgtggaggaagggaagtctatcacattgtcttgcagcgtg
acaggcgatccagttcctaatttgtactgggatgtcggtaatctggtttccaaacacatg
aatgaaacaagccacacacagggctctttaaggatcactaacatttcatctgatgacagt
ggaaagcaaatctcttgtgtagcagaaaaccttgtaggagaagatcaagattctgtcaac
ctcactgtgcactttgcaccaactatcacatttctcgaatctccaacctcagaccaccac
tggtgcattccattcactgtgaaaggcaatcccaaaccagcgctgcagtggttctataac
ggggcaatcttgaatgagtccaaatacatctgcactaaaatacatgttaccaatcatacg
gagtaccacggatgcctccagctggacaaccctacccacatgaacaatggggactacact
ctgatagccaagaatgaatatgggaaggatgagagacagatttctgctcacttcatgggc
tggcctggaactgaggaagatgcaaacctgatgtatcctgatgtaatttacacagattat
gggactgcagccaatgatattggggacaccacgaacagaagtagtgaaatccctcccaca
ggcattattgatgacacagggcgagaacatctttcggtctatgctgtggtggtaattgca
tctgtggtaggattttgtctggtggtaatgctgtttctgcttaagttggcaagacactcc
aagtttggcatgaaagatttctcatggtttggatttgggaaagtaaaatcaagacaaggt
gtgggcccagcttctgttatcagcaatgatgatgactctgccagcccactacatcacatc
tccaacgggagtaacactccttcctcttcagagggcggccccgatgccgtcattattgga
atgaccaagatccctgtcattgaaaatccccagtactttggcatcaccaacagtcagctt
aagccagacacatttgttcagcacatcaagcggcataacattgttctgaaaagggagcta
ggagaaggagcctttggaaaagttttcctagctgaatgttataacctctgtcctgagcag
gacaagatcttggtggcagtaaagacactgaaggacgccagcgacaacgcacgcaaggac
tttcaccgagaggccgagctgctgaccaacctccagcacgaacatatcgtcaagttctat
ggcgtctgtgtggagggcgacccgctcatcatggtcttcgagtacatgaagcacggggat
ctcaacaagttcctcagggcacatgggccggacgctgtgctgatggccgagggcacaccg
cccacggagctgacacagtcgcagatgttgcacatagcgcagcagatcgccgctggcatg
gtctacctggcgtcccagcactttgtgcaccgcgacctggccacccgcaactgcctggtc
ggggagaacctgctagtgaaaattggggatttcgggatgtcccgagacgtgtacagcacc
gactactacagggtcggtggccacacaatgctgcccatccgctggatgcctccagagagc
atcatgtacagaaaattcaccacagagagtgacgtgtggagcctgggggtcgtgttgtgg
gagatcttcacctatggcaaacagccctggtaccagctgtcaaataatgaggtgatagaa
tgcatcactcagggccgagttctgcagcgacctcgcacctgcccccaggaggtgtatgag
ctgatgctggggtgctggcaacgagagccccatatgaggaagagcatcaagggcatccac
accctcctccagaacttggccaaggcatctccagtttacctggatatactaggctag
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