Ochotona princeps (American pika): 101518043
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Entry
101518043 CDS
T07609
Symbol
GREB1L
Name
(RefSeq) GREB1-like protein
KO
K27478
GREB1-like protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101518043 (GREB1L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_C
GREB1_N
TAGT
GREB1_2nd
Rcd1
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
101518043
NCBI-ProteinID:
XP_004579770
LinkDB
All DBs
Position
9:complement(42817984..42940328)
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AA seq
1724 aa
AA seq
DB search
MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPVFSQLYLDPDQHPFSSADVKPKVEE
LDKDLVHRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF
CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS
GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWKECRS
RQSSAVCHSIKPNTSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKNNASSSTLPHP
GNYSVSPRPSYTSGDQATMFISGPPKKRHRGWYPGFPVPQPGLVVPVPTVRPVSRTEPFL
SAPIPQTPLTGILQPRPIPAGETVIVPENLLSNSGIRPVILIGYGTLPYFYGNVGDIVVS
PLLVNCYKIPQLENKDLEQLGLTGSQLLSVENMILLTIQYLVRLDLDNETFQIYQPQLTV
ARKLLSQVCAIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQTLQRVRQSGVLVDLGLED
NGTAHQRAEKYVVRLDNEIQSKFDVFMRKVKQNPYTLFVLVHDNSHVELTSVISGSVSHG
EPSHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISSSNEVHWIQLDTVEEVGC
EEKLYFGLNEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPRLHSMVVRCYLLIQQYSE
ALMALTTMASLRDHSTPETLSIMDDLISSPGKNKSGRGHMLIIRVPSVQLAMLAKERLQE
VRDKLGLQYRFEIILGNPASELSVAAHFVTRLKTWRGNESEEWVPRTYQDLEGLPCIVIL
TGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYVSKEVIRGPTTALDLSGK
EQERATASEHDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKAQRQPLTPSFQ
SPGPSVGLDEGVSGSPAGAGESLKQECDSLGPPLASSTTSKPSSSSSSSSSGPGTLSWPG
CRSLHTALPPVVILSKAAYSLLGSQKGGKLPSSTSLLPHADVTWLSSLRPLLHRDMSSEE
QSLYYRQWTSARQHHADYSNQPDPATGARTFHPRRLLLTGPPQVGKTGSYLQFLRILFRM
LIRLLEVDVYDEEEINTDHSENSGVRQAEGEPWPDIESFSKMPFDVSVHDPKYSLMSLVY
TEKLAGVKQEVIKEAKIEEPRKRETVSMMLTKYAAYNTFHHCEQCHQYMDFAAASQMSDS
TLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGKHLESMRLPLVSDKDLNAVKSPIF
TPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKYWPNHIMLVLPGMFNNAGVGA
ARFLIKELSYHNLELERNRLEELGVKRQCVWPFIVVMDDSCVLWNIHSVQEQTSQQMEAG
ISSKNVSLKSVLQHIEATPKIVHYAILGIQKWSSKLTRQSLKAPFSRCHVHDFILLNIDL
TQNVQYDFNRYFCEDVDFNLRTNSSGLLICRFNNFSLMKKHVQVGGQRDFIIKPKIMVSE
SLAPILPLQYVCAPDSEHTLLAAPAQFLLEKFLQHASYKLFPKAIQNFKSPVLAIDCYLN
IGREVAVCYISSRPHSSNVNCEGVFFSGLLLYLCDSFVGADLLKKFKFLKGATLCVICQD
RSSLRQTIVRLELEDEWQFRLRDEFQTANSSEDKPLFFLTGRHV
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcatatgctgggcaactgaaatctgctcgattcgaggaagctctccacaac
tccatagaagcctcactcagatgtagcagtgtggtaccacggccagttttttcccagcta
tacctggaccctgaccagcatcctttctcatctgcagatgtcaaacccaaggtggaggag
ctggataaggatttggtacatcgttacacccaaaatggaagtctggatttctctaacaat
ctaacagtcaatgaaatggaagatgatgaagatgatgaagaaatgtctgattcaaacagc
ccgccaattccctattcacaaaaacctgccccagaaggatcttgcactacagatggtttt
tgtcaagcaggaaaggatttgcgcttggtatcgctgtgtatggaacaaatcgacatccca
gcaggattcctcctggtgggggccaagtctcccaatcttcctgaacacattctcgtttgt
gctgtagacaagcgatttctaccagatgatcatgggaaaaatgcacttttagggttttct
ggaaactgtataggctgtggagaacgaggatttcggtatttcacggaattttccaaccac
attaacttgaagctcaccacgcagccaaagaagcagaagcacttaaagtactacctagtt
agaagctcccagggtgtactctcaaaaggacctcttatctgctggaaagaatgtagaagc
cgacaatcctctgctgtttgccactccattaaaccaaatacttcagtgtcatcaactgtg
acaccagaaaatggaacaacaaacggatacaaatcaggattcactcagacagatgctgct
aatggaaacagtagccacggagggaagaataatgcctccagctccactctcccccaccca
gggaattactctgtatccccaagacctagttacacatcaggagaccaagctaccatgttc
atttctgggccaccaaagaaacgacaccgaggctggtatccgggtttccctgtcccccag
cctggtttagttgtacctgttcctacagttcgccctgtttcaagaactgagcctttttta
tctgccccaattccacagaccccattaactggaattttacaacctcggcccattcctgca
ggggaaactgtcattgttcctgaaaacctgctgagtaactcaggaatcagaccagttatt
ctgataggctatggcactttaccctatttctatggaaatgttggtgacattgttgtgagt
cccctgctggtgaattgctacaagattccacagttggaaaacaaagatttggaacagtta
gggttgacaggcagccaactcctgagtgtggaaaatatgattcttctgacaatacagtat
cttgtgaggctcgatttagataacgaaaccttccagatttatcaaccacagcttacggtt
gccagaaagctcttatcccaggtctgtgctattgcggacagtggcagccagagcctagac
cttggccacttcagcaaagtggacttcatcatcattgtcccaaggtcagaggttctggtc
cagcaaactcttcaacgggtccgacagtcaggcgtccttgtagacttgggtctggaggac
aacgggacagctcatcagagagcagagaaatacgtggtgcgtctcgacaatgagatccaa
agcaagtttgatgtttttatgcgaaaagtgaaacagaacccatacacactgtttgtgctg
gttcatgacaactcccacgtggaactaacgagtgtcatttcaggctctgtgtcacacggt
gagcccagtcatggattagctgatagagtcataaactgcagagaagttctggaagctttc
aacctcttggtgctgcaagttagctccttcccgtacacactacagacccaacagtctcga
atcagctccagcaatgaggtacactggatacagctggacacggtggaggaggtgggctgt
gaggagaagctgtattttggcctgaatgagtacagcaagtctctgcagtgggggatcaca
agcccactgctgaggtgtgacgagacttttgagaagatggtgaacacactcttggagagg
taccccaggctccacagcatggtcgtccgctgctatctgctcatccagcagtactccgaa
gcgctgatggctctcaccaccatggcctcactccgggaccacagcacaccggaaactctc
agcattatggatgacctcatcagctctccaggaaaaaacaaaagtgggcggggacacatg
ctcattatcagggtgccctcggtgcagctggccatgttagccaaggagcggctgcaggag
gtgcgcgacaagctgggtctgcagtaccgattcgagatcatccttgggaacccggcctct
gaactaagtgttgcagctcactttgtgacacgattaaagacttggagaggaaatgaatcc
gaagagtgggttcctcggacatatcaagatttagaaggtctgccttgcatcgtgatatta
actggcaaagatcctcttggagaaacctttcccagatctttgaagtactgtgacctccgg
ttaattgactcaagctatttaactcgcacggccttggagcaagaggttggtctggcctgc
tgctatgtctccaaagaagtcatccggggccccacgactgccttggacctcagtgggaag
gagcaggagcgagccaccgccagtgagcacgattctgatgagctgctcattgacctggag
cggccccagagcaacagcagtgctgtcactggaacctcaggttccatcatggagaatggg
gtgagctcttccagcacagctgacaaggcccagaggcagcccctgacgcccagtttccag
agcccaggccccagtgtggggctggacgaaggggtctctggcagcccggctggagctggg
gagagtctgaagcaggagtgtgactccttgggccccccgctagcgagcagcaccacctcc
aagccttcatcctcctcctcctcttcttcctcgggacctggcacgctctcctggccagga
tgccgaagcctccacacagccctacccccagtcgtgatcttatccaaggcggcctacagc
ctgctgggctcccagaagggcggaaagctgccgtcctccacgtccctgctgccgcacgcc
gacgtgacctggctgagttcactgcgaccgctcctgcacagggacatgagcagcgaggag
cagtccctctactacaggcagtggacctctgctcggcagcaccacgccgactacagcaac
cagcccgacccggccacgggcgcccgcaccttccatccacggcggctgctgctgactgga
ccgccccaggtgggaaagactggctcctatttgcagttccttaggatcctcttccgcatg
ctcatcaggctcctggaggtggatgtgtacgacgaggaggagatcaacactgatcacagt
gagaacagcggggtcaggcaagcagagggagagccctggcctgacatcgagagcttcagt
aagatgccctttgacgtcagcgtgcacgaccccaagtacagcctgatgagcctggtgtac
accgagaagctggcgggggtcaaacaagaagtaatcaaagaagccaagattgaggagccc
aggaaaagagaaactgtgtccatgatgctgaccaaatatgcagcctacaacaccttccat
cactgtgagcagtgccaccagtacatggactttgccgccgcctcgcagatgtctgactcc
acccttcatgcattcacattctcctcctcgatgctgggagaagaggtgcagctctatttc
atcatccccaaatccaaagagagtcattttgtcttcagcaagcagggcaaacatctggag
agcatgcggctgcctctggtttcagacaaggatctgaatgcagtcaagagccctattttc
accccttccagtggtcgccacgagcacggactcttaaaccttttccacgccatggaaggc
atcagccaccttcacctgctggtagtcaaggaatatgagatgccactgtaccgcaagtac
tggcccaaccacatcatgctggtgcttcctggcatgttcaacaatgcaggcgtgggtgct
gccagattcctcatcaaggagctgtcctaccataacctagaactggagaggaaccgcctg
gaggagctgggagtcaagcgccagtgtgtgtggcctttcatcgtcgtgatggatgactcg
tgtgtcctgtggaacatccacagtgttcaggagcagaccagccagcaaatggaagcagga
atttccagtaagaatgtgtccttaaagagtgtcttgcagcatatcgaagccacaccaaaa
attgttcactatgcaattctgggcatacagaagtggagcagcaaactgactcgccagagc
ctcaaggccccgttctccaggtgccacgtgcatgatttcatcctcctcaacatagacctg
actcagaatgtgcagtatgacttcaataggtatttttgtgaagacgttgactttaacctg
agaacaaacagtagtggcctgctcatctgccgctttaataacttcagtctcatgaagaaa
catgttcaggttggcgggcaaagggacttcatcattaagccaaagatcatggtgtcagag
agcttggcacccatcctgccccttcagtatgtctgtgctcctgacagtgagcacacgctg
ctggcagcccctgcgcagtttctcctcgagaagttccttcagcacgcttcatacaaactc
tttcccaaagccatccagaacttcaagagtcctgtgttggccattgactgctaccttaac
attggacgggaggtggccgtgtgctacatcagctccagaccccactccagcaatgtcaac
tgtgaaggggtgtttttcagtggactcctcttgtacctctgtgactcttttgtaggtgct
gatcttctcaagaaatttaagtttctgaaaggtgctacactatgcgtcatttgccaggac
agaagctccttacgccaaacaattgtccgcttggagctggaggacgagtggcagtttcgc
ctgagggatgaatttcaaactgcaaacagcagtgaggacaagcccctcttctttcttact
gggcgacacgtatga
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integrated database retrieval system