Ochotona princeps (American pika): 101518259
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Entry
101518259 CDS
T07609
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101518259 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101518259 (DHX36)
03012 Translation factors [BR:
opi03012
]
101518259 (DHX36)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101518259 (DHX36)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101518259 (DHX36)
Translation factors [BR:
opi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101518259 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_14
nSTAND3
PhoH
AAA_23
ATPase
NPHP3_N
DUF6782
AAA_19
Peptidase_S64
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
101518259
NCBI-ProteinID:
XP_036350714
LinkDB
All DBs
Position
14:complement(16652560..16686162)
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AA seq
971 aa
AA seq
DB search
MSYDYHQNRGRDGGPRSSGGGHGGGRGGGGGGRGGRGRHPGHLKGREIGLWYAKKQTQKN
KDAERQERAVVHMDERREEQIVQLLNSVQAKNDPESEAQISWFAPEDHGYGTEISAENKA
SLERRVDNQEKKLINQEKRPLRIRDKSYIDRDAEYLLQSNEPDASLDQKLLEDLQKKKTD
LRYIEMQRFREKLPSYRMQKELINLIDSHQVTVISGETGCGKTTQVTQFILDDHIERGKG
SACRIVCTQPRRISAISVQRCRLPRQQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIH
ERNLQSDVLMTVVKDILNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVTEYL
LEDIIEKIRYVPEQKEHRSQFKRGFMHGHVNRQEKEEKEAIYKERWPDYVRELRRRYSAS
TVDVLEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHELLMSQVMFKSD
KFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF
DTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLE
ELCLQIKILKLGGIACFLRRLMDPPSDEAVLLSIRHLMQLNALDKQEELTPLGVHLARLP
VEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKETRSDHL
TVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVDSRSPK
DPKANINSDNEKIIKAVICAGLYPKVAKIRINLGKKRKMVKVYTKTDGLVALHPKSVNVE
QTDFQYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQ
SPARIAHLVKELRKELDILLQEKIESPHPVDWKDTQSRDCAVLSAITDLIKTQEKAVPRN
LPPRGQDGCCS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccaccagaaccggggccgcgacgggggtccccgcagctccggcggg
gggcatggcgggggccgcggcggcggaggaggaggccgaggcggccggggccggcatccc
gggcacctgaagggccgcgagatcggcttgtggtacgctaagaagcagacgcagaagaac
aaggatgccgagcggcaggagagagctgtggtacacatggacgaacgcagagaagaacag
attgttcagctgctgaattctgtccaagcgaagaatgatccggaatcggaagcgcagata
tcctggtttgctcctgaggatcatggctatgggactgaaatttctgctgagaacaaagca
agcttggaaaggagagtagacaaccaggaaaagaaattgataaaccaagaaaaaagacca
ttaagaatcagagataaatcatacattgaccgagatgctgagtatcttttgcaatcaaat
gaacctgatgcaagcttagaccaaaaattattggaagatttacaaaagaaaaaaacagac
cttcggtatattgaaatgcagcgtttcagggaaaagctgccttcgtatagaatgcaaaag
gaattgatcaatttaattgatagtcatcaggtcacagtgataagtggtgaaacgggctgt
gggaaaaccacccaggtgacgcagttcatcctggatgaccacattgagcgaggaaagggc
tcggcctgcaggatcgtgtgcacgcagccgcgcaggatcagcgccatctccgtacaaagg
tgccgcttgcccaggcagcagggttctatcttgtactgtacaacaggaatcattctccag
tggctccagtcagacccccatttatccagtgttagtcacatcgtgcttgatgaaatccat
gaaagaaatctacaatccgatgttctgatgacggtcgtgaaagatattctgaattttcgg
tctgacctgaaagtgattctgatgagtgccacgttgaatgctgagaaattttcagagtat
tttggtaactgtccaatgatacatatacctggctttacttttccggttacagagtatctg
ttggaagacataattgaaaaaataagatatgttccagaacaaaaagaacacagatcccag
tttaagaggggttttatgcacgggcacgtaaacagacaagaaaaggaagaaaaggaagca
atctataaagaacggtggccagattacgtgagggaattgcggagaaggtattctgcaagc
acagtagatgttttggaaatgatggatgatgacaaagtggatttgaatttgattgctgcc
ctcatccgatacattgttttggaagaagaggatggtgcaatactggtctttctcccaggc
tgggacaatatcagcactttacatgaactcctgatgtcgcaagtcatgtttaaatcagat
aagttcattattatacctctacattcactgatgcctacagttaatcaaacacaggtattt
aaaaaaacccctcctggtgttcgaaaaatagtcattgctaccaacattgcggagactagt
attaccatagatgatgtcgtttatgtgatagatggaggaaaaattaaagagacacacttt
gacactcagaataacatcagcacaatggctgcagagtgggtgagcaaagctaatgccaag
cagaggaaaggtcgagctggaagagttcagcctgggcattgttaccatctgtacaacggg
cttcgagcgagtctgctagatgactatcagctgccagaaattttaagaactcctttggaa
gaactatgtttacagataaagattttaaaactaggtggaattgcctgtttcctgaggagg
ttaatggacccgccgtcagatgaggcagtattgctgtccatcagacacctgatgcaactg
aatgcgttggataaacaagaagagttgacccctcttggagtgcacttagcacgcttacca
gttgagccccacattggaaagatgatccttttcggagctctcttctgctgcctcgaccca
gtgctcaccattgctgccagtctcagcttcaaagatccttttgtcatcccattgggaaaa
gaaaaagttgcagatgcaagaagaaaagaattggctaaagaaactagaagtgaccaccta
acagttgtgaatgcatttgagggctgggaagaagctagacgacgtggtttcagatatgaa
aaagactattgctgggaatattttctgtcttcaaacacactgcagatgctgcacaacatg
aaaggacagtttgctgagcatcttctgggcgctgggtttgtggacagcagaagtcccaaa
gatccaaaggctaacataaattcagacaatgagaagataatcaaagctgtcatctgtgct
ggcctgtacccgaaagttgctaaaattcgaataaatttgggtaaaaaaagaaaaatggtg
aaagtgtacacaaaaactgatggcttggttgctcttcatcccaagtctgttaatgtggag
cagacagactttcagtacaactggcttatctatcacctgaagatgagaacgagcagtata
tacttgtatgactgcacggaagtttccccatactgtctcttgtttttcggaggcgatatc
tccatccagaaggacaacgatcaggaaacaattgctgtggacgaatggattgtcttccag
tctccagcaagaattgcccatcttgttaaggaattaagaaaggaactagatatccttctg
caagagaagatcgaaagtcctcatcctgtggactggaaggacacgcagtccagagactgt
gccgtgctgtcagccatcacggacctgatcaagacccaggagaaggcggtccccaggaac
cttcctcctcggggccaggatggctgctgcagctga
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