Ochotona princeps (American pika): 101518450
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Entry
101518450 CDS
T07609
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101518450 (RNF20)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101518450 (RNF20)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
101518450 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
BRE1
zf-RING_UBOX
zf-rbx1
Toxin_SdpC
Motif
Other DBs
NCBI-GeneID:
101518450
NCBI-ProteinID:
XP_004580997
LinkDB
All DBs
Position
1A:complement(26176311..26206297)
Genome browser
AA seq
975 aa
AA seq
DB search
MSGIGNKRAAGEPGTSMPPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDL
LTERKALVVPEPEPDSDSNQERKDDRDRGEGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVTVYDKLQEKVELLSRKLNSGDHLIVEEAVQELNSFLGQENMRLQELTDLLQ
EKHHTMSQEFSKLQSKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQN
EKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQV
ELIERDELSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDSKDEPAELKQES
EDSATQSSASKASQEDATEMKSKRDEEERERERREKEREREREREKEKEREREKQKLKES
EKERDSAKDKDKGKHDDARKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDK
VQLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAM
AKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDSNFKLMSERIKSNQIHKLLKEE
KEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEA
AQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPD
NVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC
NAAFGANDFHRIYIG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaattggaaacaaaagagcagctggggaacctggcacgtccatgcctccggag
aagaagacagctgtggaagattcggggaccacagtggaaacaattaaactaggaggtgtc
tcttcaacggaggagttagacattcgaacattgcaaaccaaaaatcgcaagctggcggaa
atgctggatcaaaggcaggccattgaagatgaactgcgtgagcacattgaaaagctggaa
cggcggcaggccactgatgatgcctcactcctgattgtcaaccgctactggagtcagttt
gatgaaaacatccgtatcatccttaaacgctacgatctggagcagggtttgggagacctg
ctcacagagaggaaagcccttgttgtgcctgagccagaaccagactctgatagcaaccag
gaacgtaaagatgacagagacagaggggaagggcaagagccagctttctctttccttgct
actttggccagcagttccagtgaagagatggaatcccagctgcaggagcgagtggagtct
tcccgccgagctgtgtcccagattgtgactgtctatgataagctgcaagaaaaagtggag
ctcttgtctcgaaagctaaacagtggagatcatctgatagtggaggaagcagtgcaagag
cttaattccttccttggacaagagaatatgagactgcaggaattgacagatctccttcag
gagaagcatcacaccatgtctcaggagttctctaagttgcagagtaaggtggagacagct
gagtcacgcgtgtctgtgttggagtccatgattgatgacctgcagtgggatattgataaa
attcgaaagagagaacagcgactcaaccgacatttggcagaagtcctggagagggtgaat
tcaaaaggttataaggtatatggagcagggagtagtctctatggtggcacaatcactatc
aatgcccgaaagtttgaggaaatgaatgcagagcttgaggaaaacaaagagttggctcag
aaccgtcactgtgaactggagaaacttcggcaagactttgaggaagtcactacacaaaat
gaaaagctgaaggtggaattgcgaagtgcagtggaagaagtagttaaggaaactccagag
tatcgctgcatgcagtcccagttctctgtcttgtataatgagagcctgcagttgaaagca
cacttggatgaggcccggaccctgcttcacggcaccaggggaacccaccagcgccaggtt
gaactcattgagcgagatgaactcagtcttcacaaaaagctaaggactgaagtgatccag
ttagaagatacactggcccaggtccgcaaggagtatgaaatgctaaggatagagtttgaa
cagactcttgctgccaatgaacaagcaggcccgattaaccgggagatgcgccatctcatc
agtagcctccagaatcacaatcaccagctcaagggggaggtgctgaggtataagcggaag
ttgagggaagcccagtcggacctgaacaagacacgtctccgcagtggcagtgccctcctg
cagtctcagtccagtaccgaggactctaaggatgaacctgcagagctcaaacaagaatcc
gaggactcagccacccagtcctcggcatcgaaagcttctcaggaggatgccacggaaatg
aagtccaaacgggatgaggaggagcgggaacgagaaaggagagaaaaagagagggaacga
gaaagagaacgggagaaggaaaaggagagagaacgagaaaagcaaaagctgaaagagtca
gaaaaagagagagattctgctaaagataaagacaaagggaagcacgatgatgcgagaaaa
aaagaagcagaaattattaagcagttaaagattgaactcaagaaggcacaagagagccag
aaggagatgaaactgctgctagacatgtaccgctctgccccgaaggaacagagagacaaa
gtgcagctaatggcagctgagaagaagtcgaaggcagagttggaagatctgaggcaaaga
ctgaaggatctagaggataaagagaagaaagaaaacaagaaaatggctgacgaggatgcc
ctgcggaagatccgggcagtggaggagcagatcgaatacctgcagaagaagttggcgatg
gccaagcaggaggaagaagcgctgctctctgagatggatgttacaggccaggcctttgag
gacatgcaggagcaaaacatccgtttgatgcagcagttgcgggagaaggatgattcaaac
ttcaagctcatgtcggagcgcatcaagtccaatcagatccataagttgctcaaagaagag
aaggaggaactggcagaccaagttttgactcttaagactcaggttgatgcccagttacaa
gtggtgaggaaactggaggagaaggagcatcttctacagagcaacattggcacaggggag
aaggagctgggccttagaacccaagccttagagatgaacaaacgtaaggcaatggaggca
gcccagcttgcagatgatctcaaagcacaattggagttggctcaaaagaagctacatgat
tttcaggatgagattgtggaaaacagtgtcaccaaagagaaggacatgttcaatttcaaa
cgagcccaggaggacatctctaggcttcgaaggaaacttgagaccacaaagaaaccagac
aatgtacccaaatgtgatgagattctgatggaggagattaaggattacaaggcacgtctg
acctgtccatgctgcaacatgcgaaaaaaggacgctgtacttaccaagtgttttcatgta
ttttgctttgagtgtgtgaagacacgctacgatacccgtcagcgcaaatgtcccaaatgt
aatgctgcttttggtgccaatgatttccatcgcatctacattggttga
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