Ochotona princeps (American pika): 101518673
Help
Entry
101518673 CDS
T07609
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
opi00535
]
101518673 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
101518673 (GPC6)
Proteoglycans [BR:
opi00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
101518673 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
Others
101518673 (GPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
101518673
NCBI-ProteinID:
XP_004577461
LinkDB
All DBs
Position
8:59736665..60838356
Genome browser
AA seq
565 aa
AA seq
DB search
MPSCIGAVILPLSGLLLSLTAGADVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCRYCRGLPSVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSIQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLRTVWRTMQHSVTDIKEKLKLSKKVWSALAYAICKDE
GVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVEVDITRPDTFIRQQIMALRVM
TNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAADPDRREEDSA
AARLGHSLLSWSLVGLALAVQRLCR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttgcatcggggctgtgatccttcctctctccgggttgctgctgtccctcacg
gccggggcggacgtgaaggctcggagctgcggcgaggtccgccaggcatacggtgccaag
ggattcagcttggcggacatcccctaccaggagatcgcaggggaacacttaagaatctgc
cctcaggagtacacatgttgcacaacagagatggaagacaaattaagtcaacaaagcaaa
ctggagtttgaaaacctggtggaggagacgagtcatttcgtgcgcaccacgtttgtgtcc
aggcataagaaatttgatgaatttttccgagaactcctggagaatgcagaaaagtcgctc
aatgatatgtttgtacggacctatggaatgctgtacatgcagaattcagaagtgttccag
gacctgttcacagagctgaaaagatactacactgggggcaatgtgaatctcgaagagatg
ctcaacgacttctgggcccggctcctggaacgcatgtttcagctgataaaccctcagtat
cacttcagcgaggactacctggaatgtgtgagcaagtacacggaccagctgaagccgttt
ggcgacgtgccccggaagctgaaaattcaagtgactcgcgccttcattgcagcccggact
ttcgtccagggcctgaccgtgggccgagaagttgcaaaccgagtctccaaggtgagccca
acccctgggtgcatccgtgccctcatgaagatgctgtattgccgctactgccgaggcctg
ccctccgtgagaccctgtaacaactactgcctcaatgtcatgaagggctgcttggccaac
caggctgatctggacacagagtggaacctgttcatagatgcaatgcttctggtggcagag
cgactggaagggcccttcaacatcgagtcggtaatggaccccatagacgtcaagatttct
gaagccataatgaacatgcaagaaaacagcattcaggtgtctgccaaggtctttcaagga
tgtggccagcccaaacctgctccagctctcagatcagcacgctcagctcctgaaaatttc
aatacccgcttcaggccctataacccagaggaaagaccaacaacagctgcggggacaagc
ttggaccggctgaggactgtgtggcggacaatgcagcacagtgtcacagacataaaagag
aaattgaagctctctaaaaaagtctggtcggcgttagcctacgctatctgcaaagacgag
ggtgtcaccgcgggcacatccaatgaagaggaatgttggaatgggcacagcaaagccagg
tacttgcctgagatcatgaacgatgggctgaccaaccagatcaataatcccgaggtggaa
gtggacatcacacggcccgacactttcatcagacagcagatcatggctctccgtgtgatg
accaacaaactcaagaacgcatacaatggcaatgatgtcaacttccaggacacaagtgat
gaatccagcggctcggggagcggcagcgggtgcatggatgacgtgtgtcccacagagttt
gagtttgtcaccacggaggccccagcagctgaccccgaccggagggaagaggactcggcg
gcagcccggctcggtcactctctgctctcctggtctctggtcggcctggccctggcagtg
cagagactgtgcagataa
DBGET
integrated database retrieval system
