Ochotona princeps (American pika): 101518701
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Entry
101518701 CDS
T07609
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X5
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi03015
mRNA surveillance pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101518701 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
101518701 (ACIN1)
03015 mRNA surveillance pathway
101518701 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101518701 (ACIN1)
03041 Spliceosome [BR:
opi03041
]
101518701 (ACIN1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101518701 (ACIN1)
Spliceosome [BR:
opi03041
]
Complex C
Other components
EJC/TREX
101518701 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
101518701
NCBI-ProteinID:
XP_004584742
LinkDB
All DBs
Position
17:44148797..44181950
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AA seq
583 aa
AA seq
DB search
MLSESKEGEEKEEVTMDTSESRPENEVPEPPMPMADQVSNDDRPEGSAEDEEKKESSLPK
SFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDI
KPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEE
EEEKEPEAEPPVPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVR
TAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYST
VEEAVATRTALHGVKWPQSNPKFLCADYAEQEELDYHRGLLVDRPSEAKAEEQGVPRPLH
PPPPPPVQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRS
RSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKE
AERAERAKEREKRRKEQEEEEQKEREKEAERERTRQLEREKRREHSRERERERERERERD
RGERDRDRERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagaaagcaaagaaggtgaggagaaggaggaagtgaccatggacacgagtgaa
agcagacctgagaatgaggttccagagcctcctatgcctatggcagaccaagtcagtaat
gatgaccgcccggagggcagtgctgaagatgaggagaagaaagagagttcactgcccaaa
tcattcaagaggaagatctccgttgtctcagctaccaagggggtgccagctggaaacagt
gacacagaggggggccagcctggtcggaagcggcgttggggagccagcacagccaccaca
cagaagaaaccctccatcagtatcaccaccgagtcactcaagagcctcatccccgacatc
aaacccctggcggggcaggaggctgtcgtggatcttcatgctgatgactcccgcatctct
gaggatgagacagagcggaatggcgacgacgggactcacgacaaggggctgaaaatatgc
cggacagtcactcaggtcgttcccgcagagggccaggagaacgggcagcgggaagaagag
gaagaggagaaggagccagaagcagaaccccctgtgcctccccaggtgtcggtggaggtg
gccttgcctccacctgtggagcatgaagtcaagaaagtgactttaggtgacaccttaact
cggcgctccatcagccagcagaagtctggagtgtccatcaccatcgatgaccccgtgcga
accgcccaggtgccctccccgccccgcggcaagattagtaacattgtccatatctccaac
ctggtccgaccattcactttaggccagctaaaggagttattgggccgcacaggaaccttg
gtggaggaggccttttggattgacaagatcaagtctcactgctttgtcacgtactcaaca
gtagaggaggcagttgccacccgcactgctctgcatggggttaagtggccacagtccaac
ccgaaattcctttgtgctgactatgctgagcaagaagagctggattatcaccggggcctc
ttggtggaccgcccctctgaagcaaaggcagaggagcaaggggtaccacgacccctgcac
cccccacccccacccccagtccagccaccacaacacccccgggcagagcagcgggaacag
gagcgggcagtacgagagcagtgggcagagcgggaacgggaaatggagcggcgggagcga
acccgatcagagcgggaatgggatcgggacaaagtgcgagagggaccccgttcccggtca
cgctcccgtgaccgccgccgcaaggaacgtgcaaaatcaaaagagaagaagagtgagaaa
aaagaaaaggcccaggaggagccacctgccaagctgctggatgaccttttccggaagacc
aaggcagctccttgcatttattggctcccactgactgacagccagattgttcagaaggag
gcagagcgggctgaacgggccaaggagcgagagaaacggcggaaggagcaagaggaagaa
gagcagaaggagcgggagaaggaagctgagcgggaacggacccgacagctggagcgggag
aagaggcgggagcacagcagggagagggagagagagcgagagagggagagggagcgagac
aggggggagcgagaccgagacagggaacgagaccgagaaaggggccgggagcgagatcgc
agagacaccaagcgccacagcaggagccggagtcggagcacaccggtgcgggaccggggc
gggcgccgctag
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