Ochotona princeps (American pika): 101518761
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Entry
101518761 CDS
T07609
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101518761 (SH3TC1)
Membrane trafficking [BR:
opi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101518761 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_1
SH3_9
TPR_8
SH3_2
TPR_NPHP3
Csd3_N
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
101518761
NCBI-ProteinID:
XP_004579426
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MGTYPTDLTLQLLAVRRRSGQPAPGLQRVLRHRLRLLESDSREVARALGELSARLLSVHS
DQERIVVTFKTFEEIWKFSTYHALGFTHHCLETLLVEPAFWLPVPGEEDAQELAICVHVD
KDTLRLIHENLLLQEGSFFVLCSDGHVRATTGPLAAEKDTPLPLGRALEVPQGEGTLEAS
FSPTDPSTISKEEVATAAPEPLAPFHQWVLRASWDAMDDALQGAMVSNSTFMTVGLASAL
ADYQATGPEEMSFCTGDLIEILGAQVPGLPWCLGRHVASGQVGFLPSSLVRGQQPTAAEA
SPFLSEAESTFFGQEARFSNEDARQLLQGLAGPGMCAAYSLERVDDAVREQPGTRETPPP
SPDPTPRELLQRVNNVLERCKTQLSCPEKEPVTPGLRLVSSSGTSSPDPEEPSFCLAPEG
DWADPQGLDALLQFLDAPGYVACFRGLYAASLPWLGSVFRSIPDEEALARHLAQARAVAK
EAGLSMALARLCYLLGRLCARRLKLSQARVYLEEALGALGGSFGDLFLVVAVHAHLASVY
LKQNRAHCGRTVARAAALLLATPGHVCSTDSEDQLLKFALRRVVQARSPQAEARTCFLLA
KHYVHFKQPEEAVPFLEQLLLLPGASGTPWASDCYLLLAAIYGHKCLPYLALGCAREASL
QTPASLASLLRSARLVLHHAPRGPARHLPAQAAHYLRQALSLDMDLALRGRLCASLARLH
SQHGQHGPAIALTLQAAEAEAEASAGARLVVDELVTLAWLHLLHGRNMGALAILEALQDA
AMASVEQEGAIANMAAIALKRTGRTRQAAESYYRALRAARGLGQRRNQAVVLANLGALCL
QVGAGRLAQHYFREAVRLFSRLPSGEGGQDFTQVLLQLGHLCTCRACPQQGKCYYQWAFL
VAVETDHLEGQLRAVQHLCHFYSSVAPREAQCVVYHEFQLSLARRVADKALEGQLLETIS
RLYLSLGTERAYKSALDYTKRSLGIFIDLQKKEKEAHAWLQAGKIYYILRQNELVDLYIQ
VAQNVALYTGDPNLGLELFEAAGDIFFNGSWERDKAVSFYRDRALPLAVTTGNREAELRL
CNKLAALLAALETPQEGLEFAHMAVALSVALGDRLNERVAYHRLAALHHHLGRGELAEHF
YLKALSLCTSPLEFDEETLYYVKVYLVLGDIILYDLKDPFDAAGYYQLALAAAVDLGNKS
AQLKIYTRLAAIYHGALADGEKALLFYQKARAFACELSLRGARRPL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggggacgtatcccacagacctcactctgcagctgctggctgtgcggaggaggagtggg
cagccagctccaggcctgcagcgggtcctgcgacaccggctgcgcctgctggagagcgac
agccgtgaggtggcccgtgcacttggggagctatcggctaggctgctgtctgtccacagc
gaccaggagcgaattgtggtgacatttaagacttttgaagagatctggaagttctccacg
taccacgccctcgggttcacacaccattgcctggaaaccctgctggtggagccggccttc
tggctgccggtgcccggggaggaggacgcgcaggagctggccatctgtgtgcacgtggac
aaggacactctgaggctgatccatgagaacctcctgctgcaggaagggtccttctttgtc
ctgtgttctgatggccacgtgagagcgacgactggtcccctggccgcagagaaggatact
cctctgcctcttgggcgggccttggaggtcccacagggagaggggaccctggaagccagc
ttctcgcccaccgaccccagcacaatctccaaggaggaggtggccacagctgcgccagag
cctctggctccattccatcagtgggtgctcagggcttcctgggatgccatggacgacgcc
ctgcagggagccatggtctccaacagcacatttatgacagtgggcctggcctcggcactg
gctgactatcaggccacggggcccgaggagatgagcttctgtactggcgacctcattgag
atcctgggtgcccaggtgcctggcttgccctggtgcttgggtcggcatgtggcctctggc
caggtgggcttcctgccaagcagcctcgtccgtgggcagcaacctacagcagctgaggcc
agccccttcctcagtgaggcagagagcaccttcttcggccaggaagcccgcttctccaac
gaggatgcccggcagctgctgcagggcttggctggccctggcatgtgcgccgcctacagc
ctggaacgggtagatgacgctgtgcgggagcagccaggaacacgagaaacacctccacct
agcccagaccccacgccgagggaactgctgcagagagtgaacaatgttctggaaaggtgc
aaaacccagctcagctgcccggagaaggagccggtgaccccaggcctccgcctggtgtct
agcagcggcacgagctcaccagaccctgaggagccctccttctgcctggcccctgagggc
gactgggctgacccccagggcctggacgcactgctgcagttcctggacgcacccgggtat
gtggcctgcttccgcggcctctatgccgcctcgctgccctggctgggcagcgtgttccgc
agcattcctgatgaggaggcactggccaggcacctggcacaggcgcgtgcggtggccaag
gaggctggcctcagcatggccctggccaggctgtgctatctcctgggccggctgtgcgcc
cggcgcctcaagctctcccaggcccgcgtgtacttggaggaagctctgggggcgctgggg
ggcagctttggagacctcttcctggtggtggccgtgcacgcccacctggcctctgtgtac
ctgaagcagaacagggcacattgtggccggactgtggccagagcggctgccctgctgctg
gccacgcccggccacgtgtgcagcacagactccgaggaccagctcctcaagtttgcgctg
cgccgggtggttcaggcccggagcccgcaggccgaagcccgcacctgcttcctgctggcc
aagcactacgtccacttcaagcagcccgaggaggccgtgcccttccttgagcaactgctg
ctgctgcccggggcctcaggcaccccgtgggcctcggactgctacctgctcctggctgcc
atctatggccacaagtgcctgccctacctggctctgggctgtgccagggaggcctcgctg
cagaccccagcctcgctggccagcttgctcaggagcgcccgcctggtcctacaccacgct
ccccggggcccagctcgccacctccctgcccaggctgcccactacctccgtcaggcgctg
tccctggacatggacctggccctgcgtggccgcctctgcgccagcctggcccggctgcac
agccagcatggacagcacggcccggccattgccctcaccctgcaggcagccgaggctgag
gcagaggccagcgctggcgcccgcctcgtcgtggatgagctggtgaccctggcctggcta
cacctgctccatgggaggaacatgggggccctggccatcctggaggcactgcaggatgca
gccatggccagcgtggagcaggagggtgccattgccaacatggcggccatagcgctcaag
aggacaggcaggactcggcaggctgccgagagttactaccgcgccctgcgtgccgcgcgg
gggctgggccagaggcggaaccaggctgtggtcctggccaacttgggagccctgtgcctg
caggtgggcgcgggcaggctggcccaacactacttccgggaggccgtgaggctcttctca
cggctgcccagcggtgagggcggccaggacttcacccaggtgctgctgcagctgggccac
ctgtgcacctgccgtgcctgcccccagcaaggcaaatgctactaccagtgggcctttctg
gttgccgtggagacagaccacctagagggccagctgcgagctgtccagcacctgtgccac
ttctacagcagcgtggcaccccgcgaggcccagtgtgttgtctaccacgagttccagctc
tcgctggcccgcagggtggctgacaaggcgctcgaggggcagctgctggagaccatcagc
cggctctacctgtcactgggcaccgagcgagcctacaaatcagccctggactacaccaag
cgcagcctgggcatcttcattgacctgcagaagaaagagaaggaggcgcacgcctggctg
caggcgggaaagatctactacatcctgaggcagaatgagctggtcgacctgtacatccag
gtggcccagaacgtggccctgtatactggggatcccaacctgggtctagaactgtttgag
gcggctggggacatcttcttcaatgggtcctgggagcgagacaaggccgtgtccttctac
cgggaccgggccctgcccctggctgtgaccacggggaaccgagaggcagagctgcggctg
tgcaacaagctggcagcgctgctggccgcactggagacgccccaggagggtctggagttt
gcccacatggctgtggccctcagtgtcgccctaggcgaccggctgaatgagcgtgtggcc
taccaccggctggccgccctgcaccaccacctgggccggggcgagctggccgagcacttc
tacctcaaggctctgtcgctttgcacctcgccgctcgagttcgacgaggagacgctgtac
tacgtgaaggtctacctggtcctcggcgacatcatcctctacgacctcaaggacccattc
gacgcagctgggtactaccagctggcactggcggccgctgtggacttgggcaacaagagc
gcgcagctcaagatctacacgcgcctggccgccatctaccacggcgcgctggccgacggc
gagaaagcgctgctcttctaccagaaggcgcgggccttcgcctgtgagctcagcctccgt
ggggcccggcgcccgctctga
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