Ochotona princeps (American pika): 101518823
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Entry
101518823 CDS
T07609
Symbol
DHX37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101518823 (DHX37)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101518823 (DHX37)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
Helicases
101518823 (DHX37)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
WHD_HA2
ResIII
AAA_30
nSTAND3
ATPase
Herpes_ori_bp
T2SSE
AAA_25
AAA_16
Flavi_DEAD
nSTAND_NTPase5
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
101518823
NCBI-ProteinID:
XP_004595472
LinkDB
All DBs
Position
21:167540..185799
Genome browser
AA seq
1151 aa
AA seq
DB search
MGKLRRRYNLKGRQQAAPGPSKGAPEALPPVQLELEGKDALKGVDASNALVLPGKKKKKT
RAPPPRKERKPLSKKERKALQRVLEQKEKKSQRAELLQKLSAVQVSEAEMKLLYTTAKLG
TGERMYHSREKADEAAAQGQKMSSLRGARRKRSHQPSSEEESMSSADSEPEDAPGSEPLG
AGPPTPSLPGPGDQGPVPQHQPATAGTPARLPTAASAIPRPPAKPAVFIPVNRSPEMQEE
RLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDDSIIGVTEPRR
VAAVAMSQRVAKEMNLSERVVSYQIRYEGNVTEQTRIKFMTDGVLLKEIQQDFLLLKYKV
VIIDEAHERSVYTDILIGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLFAQPPP
VIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRR
LRKAFPHSRPQAQEKEDEKESAEEMRKFKKSRTRARKARAASTLPLISLDNYSVLPAGEG
DEDREAEVDEEEAALESDLDLDLGDDDMGGGEQLDASLPLHVLPLYSLLAPEKQAQVFRP
PPEGARLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRITWVSQASADQR
AGRAGRTEPGHCYRLYSSAVFGDFEKFPAPEITRRPVEDLILQMKALDIEKVINFPFPTP
PSVEALAAAEELLIALGALQAPQKAERAKQLQVHSSRLSCPITTLGRTMATFPVAPRYAK
MLALSRQHNCLPYTITVVAAMTVRELFEELDRPAASKEELTVLKGKRARVAQMRRTWAGQ
GASLKLGDLMVLLGAVGACEYAGCSPQFCESNGLRYKAMLETRRLRGQLTTAVNAVCPEA
GLFVDPKMQPPTESQVTYLRQIVMAGLGDHLARRVQSEELLDERWRNGYKTPLLDDPVFI
HPSSVLFRELPEFVIYQEIVETTKMYMKGVSAVEVEWIPALLPSYCQFDKPLEEPAPTYC
PEKGRVLCHRTSVFYRVGWPLPAVQVDFPEGLDRYKHFARFLLEGQVFSKLATFRSCLLS
SPNTMLKTWARLQPRTETLLSALVAEQADCRDALLAAWRKNPRYLLAQYCEWLPQAVHAD
VEKAWPPTTDL
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctgcgcaggcggtacaacctgaaggggcggcagcaggccgccccgggacct
tcgaagggcgccccggaggcgctgcctcccgtgcagctggagctggagggcaaggatgca
ttgaaaggcgttgacgccagcaatgcgctggtgctgcctggcaagaagaagaagaaaacc
agggccccgcccccacggaaagagaggaagccactgagcaagaaggagaggaaggcactg
cagagggtcctggagcagaaggaaaagaagagtcagcgcgctgagctgctgcagaagctg
agtgcagtccaggtctctgaggccgagatgaagctcttgtacactacggccaagctgggc
accggagagcgcatgtaccacagcagagagaaggctgatgaggcggcagcccagggtcag
aagatgagcagcctccgtggggcccgccggaagcgcagtcaccagccatcctcggaggag
gagtccatgtcctctgcagactcagaaccagaggacgcccctggctctgagccgctgggg
gcagggcctccgacgccatccctgccagggcctggggaccagggcccggtgccccagcac
cagcctgctacagctgggacccctgctcgccttccaacagcagcctcagccatacccagg
ccccctgcgaagcccgctgtgttcatccccgtgaaccgctcccctgagatgcaggaagaa
cggctcaagctgccaatcctctctgaggagcaagtgatcatggaggcggtggccgagcac
cccattgtcattgtgtgcggcgagaccggcagcgggaagactacgcaggtgccccagttc
ctgtacgaagcgggctacagcagtgacgacagcatcattggcgtcactgagccccgccga
gtggctgccgtagccatgtcccagagagtggccaaggagatgaatctgtcggaacgggtc
gtctcctaccagatccgctacgaagggaacgtgacggagcagacgcggatcaagttcatg
acggacggtgtgctgctcaaagaaatccagcaggacttcctgctgctgaaatacaaggtg
gtgatcattgacgaagcccacgagaggagtgtgtacacagacatcctcatcggcctgctc
tcccgcatcgtggcactgcgggcgaagaggcacctgccgctgaagctgctcatcatgtcg
gccacgctgcgagtggaggacttcacccagaaccagcggctctttgcccagccgcccccg
gtcatcaaggtggagtcccggcagttcccggtgacagtgcatttcaacaagcgcacaccg
ctggaagactacagtggcgagtgcttccggaaagtgtgcaagatccaccggatgttgcct
gcaggtggcatcctggtgttcctgacggggcaggctgaggtgcacgcgctgtgccgcagg
ctcaggaaggccttcccacactccaggcctcaggcccaagagaaggaagatgagaaagag
tcagcggaagagatgcgaaagttcaagaagtcacggacgagggcacgaaaggctcgggct
gcctcgacactgcccctgatcagcctggacaactactcggtgctgccagccggagagggc
gacgaggacagggaggcggaggtggatgaggaggaggccgccctggaatcggacctggac
ctggacctgggggatgacgacatgggtggaggagagcagctggacgcatccctgccactc
catgtgctcccgctatactcgctgttggcccccgagaagcaagcgcaggtcttcaggccg
cctccagagggtgctcggctgtgtgtggtggccaccaatgtggccgagacatcccttacc
atccctggcatcaagtacgtggtggactgtggcaaggtcaagaagcgctactatgaccgt
gtcaccggtgtgtcctccttccgcatcacctgggtctcccaggcatcggctgaccagcgg
gcgggccgggcgggccggacagagcccggccactgctacaggctgtactcatccgcggtg
tttggagactttgagaagttccctgctccagagatcacccggcggcccgtagaggacctc
atcctgcaaatgaaggcgctcgacattgagaaggtcatcaacttccccttcccaacgccc
ccctcggtggaggccctggctgctgcagaggagttgctgatcgcgctgggggccctgcag
gccccccagaaggcagagagggcgaagcagctgcaggtgcacagctcccggctcagctgc
cccatcaccacgctgggcaggaccatggccaccttccctgtggcgccccgctacgccaag
atgctggctctgagccgccagcacaactgcttgccctacaccatcactgtcgtggccgcc
atgactgtgcgggagctgtttgaggaactggacaggccggcggccagcaaggaggagctc
actgtgctgaagggcaagcgggctcgggtggcccagatgaggaggacttgggcagggcaa
ggagcatccctgaagctcggcgacctcatggtgctcctgggtgccgtaggagcctgtgag
tatgccggctgctctccccagttctgtgaaagcaatgggctgcgctacaaggccatgctg
gagacccggcgcctgcggggccagctgaccactgcagtcaatgccgtgtgccccgaggcc
gggctctttgtggaccccaagatgcagccacccaccgagagccaggtgacctacctgcgg
cagattgtgatggccggcctgggcgaccacctggcccgcagggtgcagagtgaggagctt
ctggacgagcggtggaggaatggctacaagacgcccctcctggacgaccccgtcttcatc
caccccagctccgtcctcttcagagagctccctgagtttgtgatctatcaggagattgtg
gagaccaccaagatgtacatgaaaggcgtctctgccgtggaggtcgagtggatcccggcc
ctgctgccctcttactgccaatttgacaagccgctggaggagccagcccccacctactgc
cccgagaagggccgggtgctctgtcaccgcaccagcgtgttctatcgagttggctggccg
ctccccgccgtgcaggtggatttcccggagggcctcgaccgctacaagcacttcgcacgc
tttctgctggaagggcaggtcttttccaagctggccacattccgcagctgtttgctgtcc
agccccaacaccatgctgaagacgtgggccaggctgcagcccaggacggagactctgctg
agcgccctggtggccgagcaggccgactgccgcgatgccctgctggctgcgtggaggaaa
aaccccagatacctgttggcccagtactgcgaatggctcccccaagccgtgcacgccgat
gtcgaaaaggcctggcccccaaccaccgacctctga
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