KEGG   Ochotona princeps (American pika): 101518903
Entry
101518903         CDS       T07609                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
  KO
K14308  nuclear pore complex protein Nup54
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03013  Nucleocytoplasmic transport
opi05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101518903 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101518903 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:opi03019]
    101518903 (NUP54)
Messenger RNA biogenesis [BR:opi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101518903 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 101518903
NCBI-ProteinID: XP_004596229
LinkDB
Position
15:68411134..68435710
AA seq 506 aa
MAFNFGAPSGTSGTAAATAAPTGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFSQNKGFG
FGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQPSTLGGLFSQPTQAPAQSNQLINTA
SALSAPTLLGDERDAILAKWNQLQAFWGAGKGYFNNNIPPVEFTQENPFCRFKAVGYSCM
PNNKDEDGLVVLVFVKKEAEIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVV
IYVVERSPNGTSRRVPATTLYAHFEQVSIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPP
AGVDPIIWEQAKVDNPDSEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISEDISEL
QKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCEL
NAPTQFKGRLNELMSQIRMQNHFGAVKTEERYYIDADLLREIKQHLKQQQEGLSHLISII
KDDLEDIKLVEHGLNESIHIRGGVFS
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggctttcaatttcggggctccgtcgggcacctcgggcaccgctgcagccaccgcggct
cccacgggtgggtttggaggttttggcacaacatctacaactgcaggttctgcgttcagt
ttttctgctccagctaacacaggcacaacaggactgttctctcagaacaaaggttttggg
tttggtactggtttcggcacaaccacaggaactagcactgggctgggcactggcctgggc
accggcctgggattcggaggatttaacacccagcagcaacagcagccatctacgttaggg
ggtctcttcagtcagcccacacaagctcctgctcagtccaaccagctcatcaatactgca
agtgccctttctgctccaacgttattgggagatgagagagatgctattttggcaaaatgg
aatcagctgcaggccttttggggcgcaggaaaaggatatttcaacaataacattccacca
gtggaattcacacaagaaaatcccttctgccgattcaaggcagtaggttatagttgtatg
cccaataataaagatgaagatggcctagtagttttagtttttgtcaaaaaggaagcagaa
attcgaagtcagcagcagcagttggtagaatcattgcataaagttcttggaggaaaccag
acccttactgtgaacgtggagggcattaagacgttgccggatgatcagacagaagttgtt
atttatgttgttgaacgttctccaaatggtacttctagaagagttccagccacaacgctc
tatgctcattttgaacaagtcagtataaaaacgcaattgcagcaactgggtgtaaccctt
tcaatgactagaacagaactttctcctgcacagatcaagcagcttttacagaatcctcct
gctggtgttgatcctattatctgggaacaagccaaggtagataaccctgattctgaaaag
ttaattcctgtgccaatggtgggcttcagagaacttcttcggagattgaaggttcaagac
cagatgacgaagcaacatcaaactagattagatatcatatctgaagacattagtgagctg
caaaagaaccaaactaccacgatggctaagattgcacagtataagaggaagctcatggac
ctctcacatcggacattgcaggtcctaatcaagcaggaaattcaaaggaagagcggttac
gccatccaggcggatgaagagcagttgcgagtgcagctagataccattcagtgtgagcta
aacgcacctactcagtttaagggccgacttaacgagctcatgtcccagatcaggatgcag
aatcattttggagcagtgaaaactgaagagaggtactacatagatgcagatctgttacga
gaaatcaagcagcatttgaaacaacagcaggagggccttagccacttgattagcatcata
aaagacgatctggaagacatcaaattggtggaacatggactgaatgaaagcatccacatc
agaggcggtgtgtttagttga

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