Ochotona princeps (American pika): 101518903
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Entry
101518903 CDS
T07609
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101518903 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101518903 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101518903 (NUP54)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101518903 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
101518903
NCBI-ProteinID:
XP_004596229
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All DBs
Position
15:68411134..68435710
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AA seq
506 aa
AA seq
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MAFNFGAPSGTSGTAAATAAPTGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFSQNKGFG
FGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQPSTLGGLFSQPTQAPAQSNQLINTA
SALSAPTLLGDERDAILAKWNQLQAFWGAGKGYFNNNIPPVEFTQENPFCRFKAVGYSCM
PNNKDEDGLVVLVFVKKEAEIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVV
IYVVERSPNGTSRRVPATTLYAHFEQVSIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPP
AGVDPIIWEQAKVDNPDSEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISEDISEL
QKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCEL
NAPTQFKGRLNELMSQIRMQNHFGAVKTEERYYIDADLLREIKQHLKQQQEGLSHLISII
KDDLEDIKLVEHGLNESIHIRGGVFS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaatttcggggctccgtcgggcacctcgggcaccgctgcagccaccgcggct
cccacgggtgggtttggaggttttggcacaacatctacaactgcaggttctgcgttcagt
ttttctgctccagctaacacaggcacaacaggactgttctctcagaacaaaggttttggg
tttggtactggtttcggcacaaccacaggaactagcactgggctgggcactggcctgggc
accggcctgggattcggaggatttaacacccagcagcaacagcagccatctacgttaggg
ggtctcttcagtcagcccacacaagctcctgctcagtccaaccagctcatcaatactgca
agtgccctttctgctccaacgttattgggagatgagagagatgctattttggcaaaatgg
aatcagctgcaggccttttggggcgcaggaaaaggatatttcaacaataacattccacca
gtggaattcacacaagaaaatcccttctgccgattcaaggcagtaggttatagttgtatg
cccaataataaagatgaagatggcctagtagttttagtttttgtcaaaaaggaagcagaa
attcgaagtcagcagcagcagttggtagaatcattgcataaagttcttggaggaaaccag
acccttactgtgaacgtggagggcattaagacgttgccggatgatcagacagaagttgtt
atttatgttgttgaacgttctccaaatggtacttctagaagagttccagccacaacgctc
tatgctcattttgaacaagtcagtataaaaacgcaattgcagcaactgggtgtaaccctt
tcaatgactagaacagaactttctcctgcacagatcaagcagcttttacagaatcctcct
gctggtgttgatcctattatctgggaacaagccaaggtagataaccctgattctgaaaag
ttaattcctgtgccaatggtgggcttcagagaacttcttcggagattgaaggttcaagac
cagatgacgaagcaacatcaaactagattagatatcatatctgaagacattagtgagctg
caaaagaaccaaactaccacgatggctaagattgcacagtataagaggaagctcatggac
ctctcacatcggacattgcaggtcctaatcaagcaggaaattcaaaggaagagcggttac
gccatccaggcggatgaagagcagttgcgagtgcagctagataccattcagtgtgagcta
aacgcacctactcagtttaagggccgacttaacgagctcatgtcccagatcaggatgcag
aatcattttggagcagtgaaaactgaagagaggtactacatagatgcagatctgttacga
gaaatcaagcagcatttgaaacaacagcaggagggccttagccacttgattagcatcata
aaagacgatctggaagacatcaaattggtggaacatggactgaatgaaagcatccacatc
agaggcggtgtgtttagttga
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