Ochotona princeps (American pika): 101518905
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Entry
101518905 CDS
T07609
Symbol
ZNF541
Name
(RefSeq) zinc finger protein 541
KO
K26584
zinc finger protein 541
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101518905 (ZNF541)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
101518905 (ZNF541)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELM2
Myb_DNA-binding
zf-C2H2_6
zf-C2H2_4
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
101518905
NCBI-ProteinID:
XP_036348496
LinkDB
All DBs
Position
5:3206444..3234491
Genome browser
AA seq
1211 aa
AA seq
DB search
MEQYSLGDEGALPSEMPLPSFSESQGLNCNDTLNRDLGPDTRDLLYPGLGGLDLDPSLPA
PDAPNEALEDNLDALSLYSGKDSDSGKLLEESVDPEAQVALQGEAASQPSGSRTGHMLTH
QKTKPFVCIEQGCSKSYCDYRSLRRHYEVQHGLCILKEAPPEEEACGDSPHAHEPAPGSL
HSLGPPEARSPSSLLPNRDLLRCIVSSIVHQKMPSPGPALAGPADGEGRSTACPCPTLAA
ASVPAALSTEGLEEPHVAQKEAAAELFAAIHSRAAESSGPDPAEMEPLPPQLLSTPEDWP
EGGALPARLPLFRSQTVPAGSQPSGHNFQWLRNLPGCPKSKGSNVFMVHKPPALPAHEGC
ESGQAGPGPSGASPSAEPLVGPGTGFEDTPPFSSTLMEAPGDPQYAGGGDDSWTSKKSKF
DCDAREPSPQDAQRPSGLPADATPLFQQLFLKSQESLVSHEQVQVLQMITKSQRIFSHAQ
VAATSSQLPRPEGKQATLKPWPQQPLPPASSTDSVHTGPRNPEPEGSPARRRKATIPAGP
REASPGSSRRDTKGGSKVAAAAAALTSPALDPCGKPDISSLAKQLRSSKGALDLGDIFPS
TGPRQSQLVGDEPPGAQLPGKQALAENSTAQGAAKGEKGPACSRGGGYRLFSGNPRAQRF
SGFRKEKVKMDMCCTASPSQVAMASFSSAGPPAEPPRDAKSKLTILNRIQGGNTYRTPHP
PRDENAPGACSQQNGAAANWTEPRSTFICKNCSQMFYTEKGLNSHMCFHSDQWPSPRGKQ
EQQVRERDEEERDSKEGSQHRKRRKRPPAKVLPIPPLPSASREPSPGGPQSCLRSPLFLV
DRLLKGLFQGSPYTPPPMLSPIREGSGLYFNKLCSVTAQAGPSLLISSALDQVDSSLGIC
VVKDDSKISIEPHINIGSRFQAEIPELQDRSLAGVDEHVASLVWKPWGDMTTNPETQDRV
TELCNVACSSVMPGGGTNLELALHCLHEAQGSIQVALETLLLRGPQKPRTHPLGDYRYTG
SDVWSPIEKRLFKKAFCAHKKDFYLIHKTIQTKSVAQCVEYYYIWKKMVKFDCGRMPGLE
KRARREPEEERQEEKVTCSPRERPSHRPTPEFKIKTKSYRRESILNSSPNAGPKRTPEAP
GSVEGQGVFPCRECERVFDKIKSRNAHMKRHRLQDHVEPVVRVKWPGKPFQLKEEEEEEE
ELGAAIGPLQW
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtacagcctcggagacgagggtgcccttccgtccgaaatgcccctcccgtct
ttttctgaaagccagggactcaactgcaacgataccctcaaccgggacctgggtcccgac
acgagggacctgctctaccctggcctgggcggcctggacctggaccccagcctcccagcg
cccgatgctcccaacgaggcactggaggacaacttggatgccctgtcactgtactcaggg
aaggacagcgactctgggaagctgctagaggagtctgtggaccctgaggctcaggtggcc
ctgcaaggtgaggcagcctcccagccctcaggcagccggaccggacacatgctcacccac
cagaagaccaagcccttcgtgtgcatcgagcaaggttgcagcaagagctactgcgactac
cgctccctgcgccggcactacgaggtccaacacggcctgtgcatcctgaaggaagccccc
ccggaggaggaggcctgtggggactccccccatgcccacgagccggcccccggcagcctg
cattccctggggcctccagaagccaggtcgcccagctccctcctgcccaaccgggacctc
ctgcgctgtatcgtgagcagcattgtccaccagaagatgccatcccccggcccagccctg
gcggggcctgcagatggcgaaggcaggagcacggcctgtccctgccccaccttggcagca
gcctccgttccagcagccctgagcaccgagggtttggaggagcctcatgtcgcccagaag
gaggcagccgctgagctgttcgcagccatccactccagggcagccgagagcagtggccct
gaccctgctgagatggagcccctgccgcctcagctgctgtccaccccggaggactggccc
gaaggcggggccctgcctgcccgcctgcctctcttcaggagccagacggtcccagctggc
tcccagccctcaggccacaacttccaatggctccgcaacctgcctggctgccccaagagc
aagggtagcaatgtgtttatggtccacaagccgcctgccctgccagcccacgagggctgc
gagtctggccaggctggccccgggcctagcggtgcctccccctcggcagaacccctggtc
ggcccagggactggcttcgaggatacgccgcccttctcttccacactcatggaggcccca
ggggacccccagtatgcaggaggcggagacgactcctggacctccaagaagagcaagttc
gactgtgacgcccgggaacccagcccccaggatgcccagagacccagcgggctccccgca
gatgccacgccgctcttccagcagctcttcctcaagtcacaggagtctctggtgagccac
gagcaggtgcaggtgctgcagatgatcaccaagtcccagcggatcttctcccatgcccag
gtggcggccacttcctctcagctgcccaggcctgagggcaagcaggccaccctcaagccc
tggcctcagcagcctctgccaccagcgtcatccactgactctgtccatactgggcccaga
aaccccgaaccggagggatccccggcccgcaggaggaaagccaccatacctgcgggcccc
agggaggcctccccaggcagctccaggcgagacaccaagggagggtccaaagtggctgct
gcggcagcggccctcacatcaccggccctggacccatgcgggaaaccagacatctcttcc
ctggccaagcagctgcggtcatcaaaaggcgccttggacctgggggatatctttccctcc
acaggcccccggcagagccagttagtgggggatgagccaccgggagcccagctgcccggg
aaacaggccctggccgagaacagcacggctcagggggccgccaaaggtgagaagggcccg
gcctgctcccggggtggaggctaccggctcttctcggggaaccccagggcgcagcggttc
tccggcttccgcaaggagaaggtgaagatggacatgtgctgcacggcgtcgcccagccag
gtggccatggcgtccttctcgtcagctgggcccccggcagagccgccgcgggatgccaag
tccaagctgaccatactcaacaggatccagggtggaaacacctacaggacaccccatccc
ccgagggacgagaacgcaccaggtgcatgcagccagcagaacggggccgctgccaactgg
accgagcccaggagcacattcatctgcaagaactgcagccagatgttctacaccgagaaa
gggctcaacagccacatgtgtttccacagtgaccagtggccctcgccccggggcaagcag
gagcagcaggtgagggagagagatgaggaggagagggacagcaaggagggcagccagcac
cggaagcgcaggaagcggcccccggccaaggtgctgcccatccctcccctgccctcggcc
tcccgggagccgagccccgggggcccccagagctgcctgcgttccccgctgttcctggtg
gaccgcctgctgaagggcctgttccagggttcgccctacacgccaccacccatgctcagc
cccatccgggagggctcagggctctacttcaacaagctgtgctccgtgacggcgcaggcc
gggcccagcctgctcatcagctccgcgctggatcaagtggacagctctttgggcatctgt
gtggtgaaggatgactctaagatcagcattgaaccacacatcaacatagggagccggttt
caggccgagatcccggagctgcaggacaggtcactggctggagttgatgagcacgtggcc
tctctggtctggaagccctggggagacatgacgaccaacccggagacacaggacagagtg
accgagctctgcaacgtggcctgctccagtgtgatgccaggaggcggcaccaacctggag
ctggcgctacactgcctgcatgaggctcagggcagcatccaggttgctctggagaccctc
ctcctcagaggaccccagaagcccaggactcaccctctcggcgactaccgctacacaggg
tcggacgtctggagccccatcgagaagaggctcttcaagaaggccttctgtgcacacaag
aaggacttctacctgatccacaagacgatccagaccaagtcggtggcacagtgcgtggag
tattactacatctggaaaaaaatggtcaagtttgactgcggccgaatgccagggctagag
aagcgggccaggagagagccggaggaggagaggcaggaggagaaggtcacctgcagccct
cgagagagacccagtcaccggccaactcccgagttcaagatcaagaccaagagttatcgg
agggagtccatcctcaactctagccccaacgccggccccaagcggacgcccgaggcgcct
ggaagtgtggagggccaaggcgttttcccctgccgggagtgtgagagggtgttcgacaag
atcaagagccggaatgcccacatgaagagacatcgcctccaggaccacgtggagcctgtt
gtcagggtgaagtggccagggaagccgttccagctgaaggaggaggaggaagaggaggag
gaactgggggccgccatcggccccctgcagtggtga
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