Ochotona princeps (American pika): 101518995
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Entry
101518995 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: F-box-like/WD repeat-containing protein TBL1XR1
KO
K04508
transducin (beta)-like 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101518995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101518995
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
101518995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
LisH
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_SPT8
B-prop_COPA_B_2nd
Beta-prop_SCAP
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
101518995
NCBI-ProteinID:
XP_036353432
LinkDB
All DBs
Position
9A:41705200..41706618
Genome browser
AA seq
473 aa
AA seq
DB search
MSISNDEVNFLVYRYLQESGFSHSAFTFGRESHISLSNINDALVPPAALISIIRKGLQYV
EAEVSINEDGILFDGRPIESLSLIDAEMPDVVQTRQQAYRDKLAQQQAAAAAAATNPQGT
AKHGENTANGEENRAHTTANNHTDTMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDL
LASGSGDSTARIWNLSENNTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG
SYDGFARIWTKDGNLACTLGQHEGPMFALKWNKKGNFILSAEVAKTTIIWDAHTGEAKQQ
FPFHSAPALDVDWQSNNTFASCRTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNL
LASCSDDMTLKIWSMKQDNCVHDLRAHNKEIYTIKWSPTEPGTNNPNANLMLESASFDST
XRLWDVDRGICIHTLTKHQQPMYSVAFSPNGXSASGSFDKCVHIWNTQVCLRC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagcaatgatgaggtcaacttcttggtatatagatacttgcaagagtcagga
ttttctcattcagcatttacctttggtagagaaagccatattagtctgtctaatataaat
gatgcccttgtaccacctgctgcattgatttctatcatccggaaaggtctacagtatgta
gaggctgaagttagtattaatgaggatggtatcttgtttgatggtcgaccaatagagtct
ctgtccctgatagatgccgaaatgcctgatgtagtgcaaacaagacaacaagcttataga
gataagcttgcacagcaacaggccgcagctgctgcagctgcaaccaacccacagggaact
gcaaaacatggagagaacacagcaaatggagaggagaacagagcacataccacagcaaat
aatcatactgacacaatggaagtggatggagacgtcgaaatccctcctaataaagcagtt
gtgctgcggggccatgagtctgaagttttcatctgtgcctggaaccctgttagtgatctc
ctggcatcagggtctggagactcaacagcaagaatatggaatcttagtgaaaataatacc
agtggctccacacagttagtacttagacattgtatacgagaaggagggcaagatgttcca
agcaacaaggatgtcacttctctagattggaatagtgaaggcacacttctagcaaccggt
tcatatgatggatttgccagaatatggacgaaagatggtaaccttgcttgcaccttagga
cagcatgaaggccctatgtttgcattgaaatggaataaaaaaggaaatttcatcctaagt
gctgaagtagctaagacaacgattatttgggatgcacatactggtgaagccaagcagcag
tttcctttccactcagccccggcgttggatgtggactggcagagcaacaacacctttgct
tcctgtagaacagacatgtgcattcatgtctgtaagttaggacaagaccgacctattaaa
acattccagggacatacgaatgaagtaaatgctatcaaatgggacccaactggcaatctc
ctggcctcctgttctgatgacatgactttgaagatttggagtatgaagcaagacaattgt
gtccatgatttgcgagcacataataaagaaatttatactatcaaatggagtccaacagaa
ccagggacgaataacccaaatgccaaccttatgctagagagtgcatccttcgattctacg
nttaggttatgggatgttgaccgaggaatttgcatacatactttgacaaaacaccaacaa
ccaatgtacagtgtagctttcagtcctaatggcnnatctgcaagtggctcttttgacaaa
tgtgtgcacatctggaacacacaggtatgtctgagatgttga
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