Ochotona princeps (American pika): 101519004
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Entry
101519004 CDS
T07609
Symbol
AFTPH
Name
(RefSeq) aftiphilin isoform X2
KO
K25218
aftiphilin
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101519004 (AFTPH)
Membrane trafficking [BR:
opi04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
101519004 (AFTPH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin_bdg
Motif
Other DBs
NCBI-GeneID:
101519004
NCBI-ProteinID:
XP_004580153
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Position
2:complement(45285156..45323806)
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AA seq
922 aa
AA seq
DB search
MEPDIIRMYSSSPPPLDNGAEEDDDDEFGEFGGFSEVSPSGVGFVDFDTPDYTRPKEEFV
PSNHFMPVCNFSENVDGLTSFKSIKNGNDKDITAESSPVQGQSDVLLSTTSKEIISCETL
DSSESPGVLNKVIEQRQNVGTPESFFPGDFRTEENVVHQNMQLESCNGEKPPCLEILTNG
FAGLETVNPQGTDDLDSGAHSDGQKPLSTHGTSNGDSALRPADEFTDFATFSKQERIQLE
EIGCVVLNDREALTIQENKKINRASELNSVQLSLSRSCDNKGDTDGEDQVCVSEISVMAS
RGFSVEQPGLPALQQDEFINPDPETKTWSLVDSADDSEAIRREQCKAEERRDLSNTKCDD
LSVDSIKISDAGDSVGFSKEESRKFTNFESLNIDPTEENVLDDSVKNGDSSNDFVTCNED
DFGDFGTASGTTPPCVTGTQDSMSDVTFEESSEHFPHFSEPGDDFGEFGDTNTVSCQEEM
IFTESNLRQTSDSLSEGCQLARESGGPGTGPALKLKNGQEGEFGDFDSGPDIQEAYSAFQ
DSDDFADFSSAGPSQAADWNAFEDEEKDGCSWAAFGDQQTTEAHHRKAAWQSHRTDENTG
TPRTPRTHSVPPATARGAVAGGHVQESATAVQTALLNRLERIFEACFPSIFVPDAEEEVT
SLKHLLDTSTLPVKTREALAESGELLDVWTELQDIHDAHGLRYQWGGSHSNKQLLCSLGI
DTRNILFTGNKKQPVIVPMYAAGLGMLEPTKEPLKPLSAAEKIASIGQTATMSPEMNTCT
SGQFQECLPPVQFDWSSSGLTNPLDASGGSTLLNLDFFGPVDDSSSSSSTTIPGVDPELY
ELTTSKLDISASSLKVTDAFARLMSTVEKTSTSTRKPKREEHLSAEALKVIASLPDLTFM
HAKVLMFPATLTPSTGSREKAD
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagccagacatcattcgaatgtactcttcatccccaccaccactagacaatggagca
gaggaggacgacgatgatgaatttggagagtttggtgggttttcagaagttagcccttct
ggtgtaggctttgttgattttgatacaccagattatactcgtcccaaggaagagtttgta
ccttcaaaccattttatgccagtttgcaatttctcagaaaacgtagatggccttacaagc
tttaagtccattaaaaatggaaatgataaggacatcactgctgaatcttctcctgtgcaa
ggacaatctgatgttttgctttctaccaccagcaaagaaataatttcatgtgaaacttta
gattcctctgaaagcccaggagttttaaataaagtcatagagcagagacagaatgttgga
acaccagaaagtttctttccaggagattttagaactgaggagaatgtcgttcatcaaaac
atgcagttagagagctgcaatggtgaaaagccgccctgtctggagattttgacaaatggg
tttgcagggctggaaactgtaaatcctcagggaaccgatgatctggacagcggagcccat
tcagacggacagaagcctcttagcactcatggcactagtaacggagactctgcgctgagg
cctgctgatgaattcacagattttgccacattttccaaacaggaaaggatacaacttgaa
gaaataggatgtgtagtcttaaatgatagagaagcactaactattcaggaaaacaagaaa
attaacagagccagtgaactgaattctgtacagctctctttgagtagaagctgtgacaat
aaaggagacactgatggggaggaccaggtttgtgtttcagaaataagtgtcatggctagc
agaggtttcagtgttgagcaaccaggacttccagctttgcagcaggatgaatttataaat
ccagaccctgaaacaaagacatggagtttggtagactcagctgatgattcagaagccatc
aggagagagcaatgtaaagctgaagagagacgtgatttgtctaacactaaatgtgatgac
ctgtccgtggattctattaaaatttctgatgctggggattcagttggtttttccaaagaa
gaaagtaggaagtttactaattttgaaagcctgaacattgatcccactgaagaaaatgtt
ttggacgattctgtaaaaaatggtgatagtagtaatgattttgtgacttgtaatgaggat
gattttggtgattttggcacagccagtggcacaactccaccgtgtgttactggtactcaa
gactcaatgagtgacgtcacttttgaagagtcttcagagcactttccacattttagtgaa
ccaggtgatgactttggagaatttggggatacaaatactgtttcttgccaagaggaaatg
atatttactgagtcaaacctaagacaaacttctgacagtttatcagagggatgtcagttg
gcaagagagtctggtggaccaggtactggacctgctttaaaactgaaaaatggacaagaa
ggtgagtttggagattttgattctgggccagatatccaggaggcctacagtgcttttcaa
gactcggatgattttgcagacttcagttcagctgggcctagccaagctgcagactggaat
gcttttgaggatgaagaaaaagatggttgttcttgggctgcttttggagaccagcagact
acagaagctcatcatcgaaaggcagcgtggcagtcacataggacagatgaaaacactggc
actccaagaaccccgagaacgcacagtgtccctccggccactgccagaggagcagttgct
ggtggccatgtacaggaatcggccactgcagttcagacagctttactaaaccgcctggag
cgcattttcgaagcatgcttcccttccatatttgtccctgatgctgaagaggaagttact
tccctgaagcacttgctggacacaagcaccctgccagtaaaaacaagagaggccttagct
gaaagtggggaactgttggatgtgtggactgagctgcaggacatccacgatgcacatggc
ttgagataccagtggggtggctcccacagcaacaagcagcttttgtgctccttgggaata
gacacgcgaaacattctcttcacaggcaataagaagcaacccgttatagtacccatgtat
gcagcaggattgggtatgttagagcccaccaaggaaccgttgaaaccactatctgctgca
gaaaaaatcgcttccattggtcagacagccaccatgtcaccagagatgaacacatgtaca
tctggtcagttccaggagtgtctaccacccgtccagtttgactggagtagcagtggcctt
actaaccctttagatgcgagtggaggttccactcttctgaaccttgatttctttgggccc
gtggatgacagtagctctagcagcagcaccacaatcccaggtgtggatccagagttgtat
gagttaacaacctctaagctggacatctccgcctcgagcctcaaggtgacggatgcgttt
gcaagactcatgtccacggtggagaagacgagcacgtctaccaggaaaccgaaaagagag
gagcacttaagtgcagaagctctcaaggtgatcgcgagccttcccgacctgaccttcatg
catgccaaggtgttgatgttcccagccaccctgacgccctccacaggctcccgggaaaag
gcggactga
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