Ochotona princeps (American pika): 101519044
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Entry
101519044 CDS
T07609
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X2
KO
K08528
retinoic acid receptor beta
Organism
opi
Ochotona princeps (American pika)
Pathway
opi05200
Pathways in cancer
opi05222
Small cell lung cancer
opi05223
Non-small cell lung cancer
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101519044 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
101519044 (RARB)
05222 Small cell lung cancer
101519044 (RARB)
05223 Non-small cell lung cancer
101519044 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101519044 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
opi03310
]
101519044 (RARB)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101519044 (RARB)
Nuclear receptors [BR:
opi03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
101519044 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101519044
NCBI-ProteinID:
XP_004588342
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Position
14A:complement(10449227..10799254)
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AA seq
448 aa
AA seq
DB search
MFDCMDVLSVSPGQILDFYTASPSSCMLQEKAFKACISGLTQTEWQHRHTAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECPESYEMTAELDEL
TEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRR
PSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
SGNPAEHSPSISPSSMDNSGVSQSPLVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgttctgtcagtgagtcctgggcaaatcctggatttctacacg
gcgagtccgtcttcctgtatgctccaggagaaagctttcaaagcatgcatcagtggattg
acccaaaccgagtggcagcatcggcacactgctcaatccatcgaaacccagagcaccagc
tctgaggaactggtcccaagccccccgtctccgcttcctccccctcgcgtgtacaagccc
tgcttcgtctgccaggacaaatcatcagggtaccactatggggtcagcgcctgtgagggg
tgtaagggttttttccgcagaagtattcagaagaacatgatttacacttgtcaccgagat
aagaactgtgttattaataaagtcaccaggaatcgatgccagtactgccgactccagaag
tgctttgaagtgggaatgtccaaagaatctgtcaggaatgacaggaacaagaaaaagaag
gagccttccaagcaagaatgcccagaaagctacgaaatgacagccgagctggatgagctc
acagagaagatccgcaaagctcaccaggaaaccttcccctcgctctgccagctgggcaag
tacaccacgaattccagcgctgaccatcgcgtccggctggacctgggcctctgggacaaa
ttcagcgagctggccaccaagtgcattatcaagatcgtggagtttgcaaaacgtctgcct
gggttcactggcttgaccatcgcagaccagatcaccctgctcaaggctgcctgcctggac
atcctgattcttagaatttgcaccaggtacaccccagagcaagacaccatgactttctca
gacggcctcaccctcaatcgaactcagatgcataatgctggatttgggccactcaccgac
ctcgtgttcacctttgccaaccagctcctgcctttggaaatggacgacacagaaacaggc
ctgctcagtgccatctgccttatctgtggagaccgccaggacctagaggaaccaacaaaa
gtagataagctacaagaaccattgctggaagcactgaaaatttatatccgaaaaagacga
cccagcaagcctcacatgttcccaaagatcttaatgaaaatcacagacctccgcagcatc
agtgctaaaggtgcagaacgtgtcattaccttgaaaatggaaattcctggatcaatgccg
cctcttattcaggaaatgctggagaattcggaaggacatgaacccttgaccccaagttca
agtgggaacccagcggaacacagtcccagcatctcacccagctccatggacaacagcggg
gtcagtcagtcgccactggtacagtag
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