Ochotona princeps (American pika): 101519336
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Entry
101519336 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: ski-like protein
KO
K18499
Ski-like protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04350
TGF-beta signaling pathway
opi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101519336
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101519336
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Ortholog
Paralog
GFIT
Motif
Pfam:
c-SKI_SMAD_bind
DUF489
T26G10_4
AAA_13
Motif
Other DBs
NCBI-GeneID:
101519336
NCBI-ProteinID:
XP_036348834
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All DBs
Position
6:34979636..35018338
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AA seq
683 aa
AA seq
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MPPEHGFAVPSWCISQSLECRSWSVPGVLWKHLLQGVSPPQQCGTAHPSACTCPPSPEAC
TCPHSPGACTDVGQYSLAVCQRAFSLSPQRTGPLCVTSKTQFQQFQGTCPVSPDAGISRG
KNGQMSTKDVWALCMPLAGELREPPTHCCPHPAHPNLRLLQPSSAAVLSRNPWSQTFFEK
IILRLMTDIHANGKLMSNVKKEHLEECGEAAMETDAGKQGKRTCASMPESLNLNPSLKHT
LAQFHLSSQSSLGGPAAFSARYAQESMSPTVFLPLNSSSTPTVTFLNKHPTKTPENYGPS
ARIHDTKMGDMDGIPASWIWPHEILDADAIWEGEMCLECCGMFAPQTFVMHSHRSPDKRT
CHWGFESAKWHCYLHVNQKYLGTPEEKKLKIILEEMKEKFSMRNGKRTQPKADAPSGMEL
QSWYPVIKQEGDHVSPTHSFLHPSYYLHMCDKVVVPNVSLTSAVSQSKEVTKTEANRSIL
NSSPNKKKSDSATCNLVRDTSNVGVDRDATASFLLLLKDVTCEDDKGKIMEEVMRTYVKQ
QEKLNSILQKKQQLQMEVEMLSSSKAMRELTEEQQNLQKVLESLQSEHAQRMEEFYVEQK
DLEKKLEQVMKQKCTCDSNLEKDXEAEYAAQLMELRQRLDLAEADRQELQDELRQEREAR
QKLEMMIKELKLQILKSSKAAKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgaacacggattcgcagtgccctcctggtgcatctcccaatcactggagtgt
aggtcgtggagtgttccaggtgttctctggaagcacctcctgcagggggtcagcccacca
cagcagtgtgggaccgcccaccccagcgcttgcacgtgtccacccagcccagaggcatgc
acgtgtccgcacagcccaggggcatgcacggacgtgggtcagtacagcctagctgtgtgc
cagcgtgccttctccttgtctcctcagcgcacaggaccactgtgcgtcacctccaagaca
cagtttcagcagtttcaaggaacttgccctgtgtccccagacgctggaatctccaggggg
aagaatgggcaaatgagcaccaaggatgtttgggctctgtgcatgcccttggcgggtgaa
ctccgggagcctccaacccactgttgcccccacccagctcacccaaacctcaggctcttg
cagccttcttctgctgctgtgctttcaaggaatccctggtcccaaacattttttgaaaaa
attatacttcggttgatgacggacattcatgcaaatgggaaactgatgagcaacgtgaag
aaagagcacctggaggagtgtggagaggcagcgatggagacagatgcgggcaagcagggc
aagcgaacctgtgcttccatgcctgagtctttaaacctcaatccaagtttgaaacacacg
ttggcacaattccatttaagtagtcagagctctctgggtggtccagcagccttttccgct
cgttatgcccaagagagcatgtcacctacagtatttttgcctctaaactcctcctcaact
cccactgttacatttttgaacaagcaccccactaaaacacctgaaaattacggtccaagt
gctaggatccatgataccaagatgggagacatggatggaattccagcttcctggatttgg
ccacacgaaatcctggatgctgatgccatttgggaaggggaaatgtgtctggagtgctgt
gggatgtttgcacctcaaacgtttgtgatgcattctcacagatcacctgacaaaagaact
tgccactggggttttgaatcagccaaatggcactgttatcttcatgtgaaccaaaagtac
ttggggacacctgaagaaaagaagctgaaaataattttagaagaaatgaaggagaaattt
agcatgagaaatgggaagagaactcaacctaaggcagatgcgccatcaggaatggaatta
cagtcatggtatcctgttataaagcaggaaggtgaccatgtttctccgacacattcattt
ctacatcccagctactatttacacatgtgtgataaagtggttgtccccaatgtgtcgctt
acttctgctgtatcccagtccaaagaggttacaaagacagaggcaaatcgatcaatctta
aatagttctccgaataagaagaaatctgactctgccacttgcaacttagtcagagacaca
agcaatgtgggagttgaccgtgatgctacagcctcattcctgcttcttctcaaagatgtc
acttgtgaagatgataaaggaaaaatcatggaagaagtaatgagaacttatgtaaaacaa
caggaaaaactgaactcaattttgcaaaaaaagcaacaacttcagatggaagtggaaatg
ttgagtagttcaaaagcgatgagggaactcactgaagaacagcagaatctgcagaaggta
cttgagtctttacagagtgaacatgctcagagaatggaagagttctatgttgagcagaag
gacttagagaaaaaattagagcaggtaatgaagcagaaatgtacctgtgactcaaattta
gagaaagacnaagaggccgaatatgcagcacagttgatggaactgagacagcgactggac
cttgctgaggctgataggcaagaactccaagacgaactcagacaggagcgggaggcgaga
cagaagttagagatgatgatcaaagagctgaagctgcaaattttgaaatcatcgaaggct
gctaaagaatag
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