Ochotona princeps (American pika): 101519347
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Entry
101519347 CDS
T07609
Symbol
CHD1L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101519347 (CHD1L)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101519347 (CHD1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
Torsin
ERCC3_RAD25_C
SLFN-g3_helicase
AAA_22
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
101519347
NCBI-ProteinID:
XP_012781481
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All DBs
Position
13:107942518..107990345
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AA seq
796 aa
AA seq
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MVASWEMRWAWARPARFAPGLCCVTYAGDKEERAHLQQDLKQESQFHVLLTTYEICLKDA
SFLKSFHWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFNLLLTGTPIQNSLQELYSLLSFV
EPDIFSKEQVEEFVQRYHDIEKESKSANELHELLQPFLLRRVKAEVAAELPRKTEVVLYH
GMSALQKKYYKAILMKDLDAFENGVTKKIKLQNILSQLRKCVDHPYLFDGVEPEPFEVGD
HLIEASGKLHLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGE
ERYLAIKNFGRQPIFTFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQ
SKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHLTLGAQKPSTEGDLQLSEILKF
GLDKLLSSEASTVDEIDLESILGGTEDGQWVSDALPAAEGRNEEQEEGKNHMYLFEGKDY
SKEPSKEDRRSFEQLVALQKTLLEKTRQEGRSLRNRGGVLIPGLVEESAKRRRVLSPEEL
EDRRKKRLEAAVKRKRTMEENRRKKEEAEQQKKMAWWESNNYQSVCLPSEESEPEDPEDG
EDESSAELDYDEDPDTTSIKYVSGDVTHPQAGAEDALIVHCVDDSGRWGRGGLFTALETR
SAEPRRVYELAGKMKDLSLGGVLLFPIDDKESRNEGQDLLALIVAQHRDRSNVLSGIKMA
ALEEGLKKLFLAAKKKKASVHLPRIGHATKDFNWYGTERLIRKHLAARGIPTYIYYFPRS
KAAALHSQSSSFSANS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggttgcatcctgggagatgagatgggcctgggcaagacctgccagatttgctccaggt
ctttgttgtgtaacatatgcaggagacaaagaggaaagagcccaccttcagcaagatcta
aagcaggagtcacagtttcatgtactgctgaccacctatgagatttgcttgaaagatgca
tcatttctaaaatccttccactggagtgttcttgttgtggatgaagcccacaggttgaaa
aaccaaagctccctgctgcataagacgctctcagagttctctgtagtcttcaatctcctg
ttgaccggaactcccatccagaacagcctccaggaactctactccctcctcagttttgtg
gagcctgacatcttttccaaggagcaggtggaagaatttgttcaacgttatcatgatatt
gagaaagagtccaagtcagcaaacgagctccatgagctcctgcagccctttctgctgaga
cgagtgaaggctgaggtggccgcggagctgcccaggaagacggaagtggtgctgtaccac
ggcatgtcggccctacagaagaagtactacaaggccattctgatgaaggacctggatgca
tttgaaaatggtgtgacaaagaaaattaaactccagaacatcttgtcccagcttcgaaag
tgtgtagatcacccttacttatttgatggagtggaaccagagccttttgaagttggggac
cacctgattgaggctagtgggaaacttcacctgctggataagctgctggccttcctgtac
tccaggggccatcgggttttacttttctcccagatgacccagatgttggatattctccaa
gactatctggactacagaggctacagctatgagcgtgtggatggctctgtgcgaggagag
gagagatacctggccatcaagaactttggacggcagcccatttttaccttcctcctgagc
acccgagcaggtggagttggcatgaacttaacagcagcagataccgttatttttgtggac
agcgattttaatcctcagaatgatctgcaggcagctgccagagcacaccgcattgggcag
agcaagtctgtcaaagtgattcggctgattggtcgagataccgtggaagagatagtctac
aggaaggcggcctccaaactgcagctcaccaacatgatcatagaaggaggtcatctcaca
ctgggagcccagaaaccttccacagagggtgaccttcagctgagtgagatactcaaattt
ggtttggataaactgctctcctctgaggctagcaccgtggatgaaatagacctggagtcc
atcctgggaggaacagaagatggacagtgggtctctgatgccttgccagctgcagaagga
aggaatgaagagcaagaggaaggaaaaaaccacatgtacttatttgaaggtaaagattat
tccaaagagcccagtaaggaagacagaagatcatttgaacaactggtggcgcttcagaaa
acccttctggagaagacgcgtcaagagggccggtcactgcgaaacagaggcggtgtgctt
atcccgggccttgtggaggagtctgccaaaaggaggcgtgttctgagcccagaggagctg
gaggacagacggaagaagagactagaagcagcagtcaagaggaagaggacgatggaagag
aataggaggaaaaaggaagaagctgagcaacagaaaaagatggcctggtgggagtccaac
aactaccagtctgtctgcctgccctccgaggagagcgagccggaggaccccgaggatggg
gaggacgagagctctgccgagctggactatgatgaggacccagacacaacctccattaag
tatgtcagtggtgacgtcacccaccctcaggccggagctgaggatgccctcattgtgcac
tgtgtagatgactctggccgctggggcagaggtggtttattcacagctctagaaactcga
tcagctgaaccaagaagggtctatgaactggctgggaaaatgaaagacttgagtttggga
ggtgtccttttatttcctatcgatgataaagagtcaagaaatgaaggacaggatttgttg
gccttgatcgtagctcagcaccgtgatcgttccaatgtcctgtccggcattaagatggca
gccctagaggaaggcctgaagaaattatttctagcagcaaagaagaagaaagcaagtgtc
catctgccccgcattggacatgccacgaaggactttaactggtacggtactgagcgactt
attcggaaacatctggctgcaagaggcatcccaacttacatatattattttcctagaagc
aaggctgctgcccttcattcacagtcctcctctttttcagcaaacagctaa
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