Ochotona princeps (American pika): 101519419
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Entry
101519419 CDS
T07609
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101519419 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101519419 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101519419 (PDLIM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101519419
NCBI-ProteinID:
XP_004580318
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All DBs
Position
18:28940710..28987754
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AA seq
269 aa
AA seq
DB search
MSTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAVANLCVGDNITAIDGENTSS
MTHLEAQNKIKGCTDNMTLTISRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASVAAPRVITNQYNNPVGLYSSENISTFNSALEARTAASGEETNSRPLD
HPQPAGGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAAQKLPMCDKCGAGIV
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccagcagatagtcctccagggtccgggaccctggggcttccgcctcgtgggc
ggcaaggacttcgagcagcccctcgccatttcccgggtcactcccggaagcaaggctgct
gttgctaatttatgtgtcggagataacatcacagccattgatggggaaaacaccagcagt
atgacgcatttggaagcgcagaacaaaatcaagggctgcacggacaacatgacgctcacc
atctcaagatcagagcagaaaatctggtctcccctggtgacggaggaggggaagcgccat
ccgtacaagatgaacttggcctcggaaccccaggaggtcctgcacataggaagtgcccac
aaccgaagtgccatgcccttcactgcctcgcctgcctccgtcgctgcccccagggtcatc
accaaccagtacaataacccagttggcctctactcttcagagaacatctcaaccttcaac
agtgccttggaggcgaggactgcagccagtggggaggagaccaacagcagacccttagac
catccgcagcctgcaggcggcctcgtcatcgacaaagaatcggaagtttacaagatgctg
caggagaagcaggagttgaatgagcccccaaagcagtccacgtcattcctggtcctgcag
gaaatcctggagtctgaggaaaaaggggatcccaacaagccctcaggattcagaagtgtt
aaagctcccgtcaccaaagtggccgcgtcgattggaaacgctgctcagaagttgcccatg
tgtgacaaatgtggcgctggcattgtgtga
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