Ochotona princeps (American pika): 101519608
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Entry
101519608 CDS
T07609
Symbol
TMC2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101519608 (TMC2)
03037 Cilium and associated proteins [BR:
opi03037
]
101519608 (TMC2)
Transporters [BR:
opi02000
]
Other transporters
Pores ion channels [TC:
1
]
101519608 (TMC2)
Cilium and associated proteins [BR:
opi03037
]
Other cilia and associated proteins
Stereociliary proteins
101519608 (TMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
101519608
NCBI-ProteinID:
XP_004586044
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All DBs
Position
4A:complement(17591765..17635579)
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AA seq
904 aa
AA seq
DB search
MSLQSQGLEETARGGGRGQARSSSPSTGDRSGKRPSRKPVPKANTAPGRHGAQWGRKERT
PGSPRLGSPRRKQAESGRRGQELRGRERSFANRTRDSRRKRDQRASLKEQSASSKKGKRR
RRKEEPWERQKKPRSLSLASSEDSLSEEELARILEQVEEKKKLIATMRNKPWPMAKKLTE
LREAQEFVEKYEGALGKGKGKRLYAYRMLMAKKWVKFKRDFDNFKMQCIPWEMKIKDIES
HFGSSVASYFIFLRWMYGVNLVLFGLIFGLVIIPEVLMGVPYGSIPRKTVPRAEQEKAMD
FSVLWDFEGYIKYSALFYGYYNNQRTIGWLRYRLPMAYFMVGVSVFGYSLMIVIRSMASN
SQGSTSEGESDNFTFSFKMFTSWDYLIGNSETADNKYASITTSFKESIVDEQESNKEENI
HLTRFLRVLANFLIICCLCGSGYLIYFVVKRSQEFSKMQNVSWYERNEVEIVMSLLGMFC
PPLFETIAALENYHPRIGLKWQLGRIFALFLGNLYTFLLALMDDVHLKLSHEETIKNITH
WTLFNYYNSSNWNESVPRPPLHPADVPRGSCWETAVGIEFMRLTVSDMLVTYITILVGDF
LRACFVRFMNHCWCWDLEAGFPSYAEFDISGNVLGLIFNQGMIWMGSFYAPGLVGINVLR
LLTSMYFQCWAVMSSNVPHERVFKASRSNNFYMGLLLLVLFLSLLPVAYTIMSLPPSFDC
GPFSGKNRMYDVLHETIENDFPTFLGKIFAFLANPGLIIPAILLMFLAIYYLNSVSKSLS
RANTQLRKKIQALREVEKSHKSLRGKATARDSGHPLESSSKNATPLQLTKEETTPHSASQ
SQTQDKKAQDPRMDASVAGRSMPSASQHLPRAHSPSVRADPGQARSQAHLWRSGSGKGAQ
RPHY
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccagtcccagggcctggaggagacagcccgaggaggagggagagggcaggcc
aggagcagctctccaagcacaggtgacagatccgggaagaggccgtcaaggaaaccagtc
cccaaagccaatacggcaccgggcaggcatggagcccaatggggcagaaaagagcgaacc
ccgggcagccccaggctggggtcccccaggaggaagcaggcggagagcgggcgacgtggc
caggagctgcgggggcgggaacgaagctttgccaacaggacccgcgacagcaggaggaag
agggaccagcgggcttccctgaaggagcagagcgcgtcctcaaagaagggaaagagacgt
cggaggaaggaggagccgtgggagcgacagaagaaacccaggtcactttcattagcctcc
agtgaggactctctgtctgaggaggagttggcccgcatcctggagcaggtggaggaaaag
aagaagctcattgccactatgcggaacaagccctggcccatggccaagaagctaactgag
ctcagggaggcccaagagtttgtggagaagtatgaaggagccttgggaaaggggaaaggc
aagagactgtacgcatacaggatgctgatggcgaagaaatgggtcaagttcaagagagac
tttgataattttaagatgcaatgtatcccctgggaaatgaaaatcaaagacattgaaagt
cactttggttcttcagtggcatcgtatttcatctttctccggtggatgtatggagtcaac
cttgtcctttttggtttaatatttggtctcgtcataatcccagaggtactgatgggcgtg
ccctatggaagtattcccagaaagacagtgcctcgggctgagcaagaaaaagctatggac
ttctctgtcctctgggactttgagggatatatcaagtactcggctctcttctatggctac
tacaacaaccagaggaccattgggtggctgaggtacaggcttcccatggcttactttatg
gtgggggtcagcgtgtttggctacagcctgatgattgtcatcagatcgatggccagcaat
tcccaggggagcacgagcgagggggagagtgacaattttaccttcagtttcaagatgttc
accagctgggactacctcatagggaattcagagacagctgacaacaaatatgcctccatc
accaccagcttcaaggaatcaatcgtggatgaacaagagagtaacaaggaagaaaatatc
catctgacaagatttctgcgtgttctggctaactttctcatcatttgctgcttgtgtggg
agtgggtacctcatttactttgtggtaaagcgatcccaagaattctccaaaatgcaaaat
gtcagctggtatgaaaggaatgaggtggagatcgtgatgtccctgcttgggatgttttgt
ccccctctgtttgaaaccattgctgccttggagaattaccacccacgcattggactgaag
tggcagctgggacgcatctttgcgctcttcctggggaacctctacacatttctcttggcc
ctgatggatgatgtccacctcaagctttctcatgaagaaacaataaagaatatcacccac
tggactctgtttaactattacaactcctccaactggaatgagagtgtcccccggccaccc
ctgcaccctgcagacgtgccccggggctcttgctgggagacagccgtgggcattgaattc
atgaggctgacagtgtctgacatgctggtaacgtacattaccatcctggtgggggacttc
ctgcgggcttgttttgtccggttcatgaaccactgctggtgctgggacctggaggctggc
tttccctcgtatgctgagtttgacattagtggaaatgtcctgggtttgattttcaaccag
ggaatgatctggatgggctccttctatgccccgggactggtgggcatcaacgtcctgcgc
ctgctgacctccatgtacttccagtgctgggccgtgatgagcagcaacgtgccccacgag
cgcgtgttcaaggcctcacgctccaacaacttctacatgggcctgctgctgctggtgctc
ttcctcagcctcctgccggtggcctataccatcatgtcgctcccgccctcctttgactgt
ggcccgttcagtgggaaaaacagaatgtacgacgtcctccatgagaccattgaaaacgat
ttcccgaccttcctgggcaagatcttcgctttccttgccaacccaggcctcatcatccca
gccatcctgctgatgttcctggctatctactacctgaactcagtttccaaaagtctttcc
cgagccaatacccagctgaggaagaaaatccaggcgctccgtgaagtcgagaaaagccac
aaatctctcagaggcaaagccacggccagagactcagggcatccactggaaagcagttcc
aaaaatgccaccccactccaactcaccaaggaagagaccacacctcactctgccagccaa
agccagacccaggacaagaaggcacaggaccccaggatggatgccagtgttgctggcagg
agcatgccatctgcctcccagcacctccctcgagctcattccccaagtgtcagagcagat
cctggccaagcccggtcacaggctcatctctggaggtcaggctctggcaagggtgcccag
aggcctcactactga
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