KEGG   Ochotona princeps (American pika): 101519771
Entry
101519771         CDS       T07609                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
opi  Ochotona princeps (American pika)
Pathway
opi04512  ECM-receptor interaction
opi04514  Cell adhesion molecules
opi04820  Cytoskeleton in muscle cells
opi05205  Proteoglycans in cancer
opi05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:opi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101519771 (SDC4)
   04514 Cell adhesion molecules
    101519771 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101519771 (SDC4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    101519771 (SDC4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    101519771 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:opi00535]
    101519771 (SDC4)
Proteoglycans [BR:opi00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   101519771 (SDC4)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 101519771
NCBI-ProteinID: XP_004586126
LinkDB
Position
4A:complement(29423852..29441803)
AA seq 199 aa
MAPARLCALLLFLLGAAAAESIRETEVIDPQDLLGGQYFSGAPPDDEDVGGPGQEPDDLE
LSGSGDLDDWEEPRISPEVIKPLVPFDNHIPEGARPGSRLPSQPKDLEENEVVPKKISPF
EGDEDISNKVSMSSTAQSSNIFERTEVLAALIVGGIVGILFAVFLILLLVYRMKKKDEGS
YDLGKKPIYKKAPTNEFYA
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcccccgctcgcctgtgcgcgctcctgctgtttctcctaggcgcggccgccgccgag
tcgatccgggaaacagaggtcattgacccgcaggacctcctgggaggccagtacttctcc
ggagccccaccggacgacgaggatgtcggcggcccagggcaggagcctgatgaccttgag
ctgtctggctctggagacctggatgactgggaggagcccaggatctcccctgaagtgatc
aagcccttggtgccctttgataaccacatccctgagggcgccaggcctgggagccggttg
cccagccagcccaaggacctggaggagaatgaagttgtccccaagaagatctcacccttt
gagggggatgaagatatctccaacaaagtgtccatgtccagcactgcccagagcagtaac
atctttgagcgaaccgaggtcctagcagcgctgattgtgggaggcatcgtgggcatcctc
ttcgccgtcttcctgatcctgctgctggtctaccgcatgaagaagaaggacgaaggtagc
tacgacctgggcaagaagcccatctacaagaaggcccccaccaacgagttctacgcctga

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