Ochotona princeps (American pika): 101519985
Help
Entry
101519985 CDS
T07609
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101519985 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101519985 (PDS5A)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
101519985 (PDS5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
Cnd1
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
101519985
NCBI-ProteinID:
XP_004579200
LinkDB
All DBs
Position
2A:complement(24199974..24295327)
Genome browser
AA seq
1338 aa
AA seq
DB search
MDYTAQPKPATALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSE
DEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFI
TRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFDLEDCNEIFIQLFRTLFSVINNSHN
KKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIE
ACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERL
AVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKD
LTEYLKVRSHDPEEAIRHDVIVTIITAARRDLTLVNDQLLGFVRERTLDKRWRVRKEAMM
GLAQLYKKYCLHAEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLET
EERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANNSAMFGKLM
TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANP
KQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGL
ELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTL
IPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEPLSRSLNADVPEQLITPLVSL
GHISMLAPDQFASPMKSVVANFIVKDLLMNDRSSGEKNGKLWSPDEEVSPEVLAKVQAIK
LLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLA
QEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDP
VKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQD
VDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCD
VALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFANDKSYISEETRVLLLTGKPKPTGV
LGAVNKPLSATGRKPYVRSTGTEGGSNINVNSELNAATGNRSREQSSESGETGISENEEN
PVRIISVTPVKNIEPVKNKEINSDPAPQGNISSDRGKKRTVTAAGAENIQQKHEDQEGES
GPPAPSKPRRGRRPKSESQGNAAKNDDLNKPVSKGRKRAAVSQESPGGLEAGNAKAPKLQ
DVTKKAAPAERQIDLQRY
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggactacacggcgcagcccaagcctgccactgccctctgcggcgtcgtgagcgccgat
gggaagatcgcctacccaccgggggtgaaggagatcactgacaagatcaccaccgacgag
atgatcaaacggctgaagatggtagtaaaaacctttatggatatggatcaggattcagaa
gatgagaagcagcagtatctcccactagccttgcatcttgcatctgaattcttcctcagg
aaccccaataaagatgtgcgtctccttgtagcatgttgtctggctgacatctttcgaatc
tatgccccagaagctccatatacttctcatgataaacttaaggatatatttttgttcatt
accagacaattaaaaggtttggaggatacaaagagtccgcagtttaatagatacttttat
ttattagagaatttagcttgggttaaatcatacaacatctgctttgatttggaagattgc
aatgaaatttttattcaactttttagaactctgttctcagtgatcaataatagccacaat
aagaaagtacaaatgcatatgctggatttgatgagttctatcatcatggaaggtgatgga
gttactcaagaattattggactccattctcattaacctcattccagcccataagaactta
aataaacagtcctttgaccttgcaaaagttctcttgaaaagaacagttcagactattgag
gcatgcattgccaattttttcaatcaagtcttggtgctgggaagatcatcagtgagtgat
ttgtcagaacatgtatttgatctgattcaggaactttttgctatagaccctcatctatta
ttatctgtcatgccgcagcttgaattcaaactgaagagcaatgatggggaggaacgatta
gctgttgttcgacttctagctaaattatttggttctaaagattctgatttggcaacacaa
aatcgtcctctttggcagtgttttcttggacgatttaatgacattcatgttccggtgaga
ttagaaagtgtgaaatttgccagtcactgtttaatgaatcacccagatttagcaaaggat
ctcacagaatatttgaaggttagatcacatgaccccgaagaagctattcgtcacgatgtc
attgttaccataataacagctgccagaagagacctcacgttagtaaatgatcagttgctt
ggctttgtacgagaaaggacactggataaacggtggcgagtgagaaaagaagctatgatg
ggtctggctcagctctataagaaatactgcctacatgctgaagcaggaaaggaagcagca
gaaaaagtcagctggatcaaggataaacttctgcatatttattatcagaacagcatcgat
gacaaactgttggtagagaaaatctttgctcagtaccttgtccctcataacctggaaaca
gaagagagaatgaaatgcttgtattatctgtatgctagtttggatccaaatgctgtgaaa
gctcttaatgaaatgtggaagtgtcagaacatgctgcggagtcatgtgcgcgaactacta
gatttgcacaagcagcctacatcagaagctaacaattctgccatgtttggaaaattgatg
accatagcaaagaatttgcctgatcctggcaaagcacaagattttgtgaagaaatttaac
caggttcttggcgatgatgaaaagctgaggtctcagttggagttactcatcagccctacc
tgttcctgcaagcaggcggatgtttgtgtgagagaaatagctcggaaacttgcaaatcct
aagcagccaacaaacccatttctagagatggtcaaatttctgttagaaagaattgcacct
gtgcacattgactcagaagccatcagtgcacttgtaaaattgatgaataaatcaatagag
gggacagcagatgatgaagaggagggtgtaagtccagatactgctattcgttcaggactt
gagcttctaaaggttctgtctttcacacatcctacctcgttccactctgcagagacatat
gagtccttgttgcagtgcctgaggatggaggatgataaggtagcagaagctgctatacaa
atttttagaaatacaggccacaaaatagaaacagatcttccccagatacgatcgacttta
ataccaattttacatcagaaggcaaagaggggtactccgcaccaggcaaaacaggctgtg
cactgtatacatgccatattctcaaataaggaagtccaacttgcacagatttttgagcca
ctaagtaggagtttgaatgccgatgttccggagcaacttataactccgctagtttccttg
ggccacatttccatgttagctccagatcagtttgcttccccgatgaaatctgtagtagca
aattttattgtgaaagatctgctaatgaatgacaggtcatcaggtgagaagaacgggaag
ttatggtctccagatgaagaggtctctcctgaagtactagcgaaggtgcaggcaattaaa
cttctggtaaggtggctattgggtatgaaaaacaaccagtctaaatctgccaattcaact
cttcggttattatcagcgatgttggttagtgagggtgacctgacagagcaaaagaggatc
agtaaatctgatatgtctcgcttgcgattagctgctggtagtgccataatgaagcttgct
caggaaccttgttaccatgaaattattaccccagagcagtttcaactctgtgcacttgtt
attaatgatgagtgttaccaagtaaggcagatttttgctcagaagctacataaggcactt
gtgaagttactgctcccattggagtacatggcgatctttgccttgtgtgccaaagatcct
gtgaaggaaagacgagcgcatgcacgacagtgtttgctaaaaaatattagtatacgcagg
gagtacattaaacagaatcctatggctactgagaaattattgtcactgttgcctgaatat
gtagttccatatatgattcatctgctagcacatgatccagattttacaagatcacaagat
gttgatcaacttcgtgatatcaaagagtgcctatggttcatgcttgaggttttaatgaca
aagaatgaaaacaatagccatgcctttatgaagaagatggctgaaaatatcaagttaacc
agagatgcccagtctccagatgaatccaaaacaaatgagaaactttacacagtatgtgat
gtggctctgtgtgttataaatagtaaaagtgctttgtgcaatgcggattcaccaaaggat
ccagtcctcccaatgaaattttttacacagcctgaaaaggatttcgctaatgacaagagt
tatatatcagaagagacaagagtactactgctcaccggaaagccaaagcctacaggagta
cttggtgcagtaaacaagcctttatcggcaacgggaaggaaaccttatgtcagaagcact
ggcactgagggtggaagtaatattaatgtaaattcagagctgaatgctgcaaccggaaat
cgatcaagggagcagagttcggagtctggagaaactggcattagtgaaaatgaggagaac
cctgtgagaattatttctgttactcctgtaaagaatattgaaccagtaaagaataaggaa
attaattctgatccggctccccagggcaatatcagcagtgaccgggggaagaaaaggaca
gtaacggcggctggtgccgagaacatccagcaaaaacacgaggaccaggagggtgaatcc
ggcccgcctgccccgtcgaaacccaggagaggacgtcgacccaagtctgaatctcagggc
aatgcagcaaaaaatgatgatttaaacaagcctgtcagcaaaggaaggaagagagctgct
gttagtcaggagagcccaggcgggttggaagcaggcaacgccaaagcacccaaattgcaa
gatgtcaccaaaaaggcagcaccagcagagagacaaattgacttacaaaggtactaa
DBGET
integrated database retrieval system
