Ochotona princeps (American pika): 101519997
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Entry
101519997 CDS
T07609
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
opi01009
]
101519997 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101519997 (RPAP2)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101519997 (RPAP2)
Protein phosphatases and associated proteins [BR:
opi01009
]
HAD phosphatases
Fcp/Scp phosphatases
101519997 (RPAP2)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101519997 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
101519997
NCBI-ProteinID:
XP_012781438
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All DBs
Position
13:81832768..81914862
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AA seq
614 aa
AA seq
DB search
MFLKGGQRNGGGGSSQLPNYISTQGCGGNRLMSSQKLRCGEECSEGIAKAELEAAVRKKI
EFERKALRIVEQLLEENITEEFLLECGKFITPAHYSDIVDERSIIKLCGYPLCQKKLGIV
PKQKYKISTKTNKVYDITERKSFCSNFCYKASKFFEAQIPKTPIWVREEDRYPDFQLLKE
GQSGDSGEEVQLRSEAVKASDIDNPGHFEKQCESGSSSTCSDSASDNEQDFVSSILPQNK
PSEMCLKPQLHKKNIMKKKTGEKVNSKHADQEQTVVDITRQLSSCGLDSQDKPACELPSQ
KNTQISSNSPVQERLKATENSAKQYSASEITLVGISKKSAEHFKKKFARSKQVSSSVQVC
PEVAKTNLLQVLKETLTEWKTEETLRFLHGQNYASVCLNPSSASLVNEELDEDDINSDAE
SHCPAVRASQSSLDESLPFRGSETAIKPLPSYELLKKETETLNLRIREFFRGRYVLNEET
TKSEDSEEHDPTFPLVDSNAQSQIRKRIVLEKLSKVLPALLGPLQITLGDIYTQLKNLVR
TFRLTNRNIIHKPAEWTLIAMVLLSLLAPILGIEKHSRENVFTQFLATLLSELDLKNEDL
ESLTIIFRTSCQPK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaaaagggggtcagaggaatggaggaggaggcagttcccagctgccaaactac
atcagcacccaaggatgtgggggtaaccgcttgatgtcatctcagaaactccgatgtgga
gaagaatgttctgagggtattgcgaaagcagaactagaagcagctgtgaggaagaagatt
gagtttgagagaaaagctctacgtatcgttgaacagcttttagaagagaatattacagaa
gaattcctgttggaatgtgggaaatttatcacacctgctcactacagtgatatcgtggat
gagcgttctattatcaaactttgtggttaccccttatgtcagaagaaactgggaatcgta
ccaaagcagaaatacaaaatttctaccaaaaccaataaagtatatgatattactgaaaga
aagtctttttgcagtaatttttgttacaaagcatccaagttttttgaagcacaaattcct
aaaactccaatatgggttcgagaagaagacaggtatcctgattttcagctgctaaaggaa
ggacaaagtggtgattctggtgaagaggtgcagttacgcagtgaagctgtcaaagcatca
gatattgataatcctgggcattttgaaaagcagtgtgaatctggttcatctagcacttgt
agtgacagtgccagtgataacgagcaggattttgtttcttccattctcccacaaaacaag
ccaagtgaaatgtgtttgaagccacagctgcacaagaagaacataatgaaaaagaaaact
ggtgaaaaagtgaactctaaacacgcagaccaagaacagacggtagtagatatcaccagg
cagttaagcagctgcggattagatagtcaggataaacctgcttgtgaacttccttcacag
aaaaacactcagatttcttcaaacagtcctgtgcaagaaagattgaaagctacagaaaat
tctgcaaagcagtacagtgcatcagaaataactctagtgggcataagtaagaaaagtgct
gaacattttaagaagaaatttgccagatcaaagcaagtttctagttcagtgcaggtgtgc
cctgaagttgcaaagacaaatttacttcaagtcctgaaggagactttgacagagtggaag
acagaagaaactctgaggtttttacatggtcagaattatgcttctgtgtgtctaaaccca
tcttcagcatctctggttaatgaagagcttgatgaagatgacataaactctgacgcagag
agtcactgtcctgctgtgagggcgtctcagagcagcttggatgaatctctaccttttaga
gggtcagagacagccattaaaccactgccaagttatgagctcctgaaaaaagaaactgaa
acactaaatctgaggatcagagaattttttagaggacgatatgttttgaatgaagaaacc
actaagtcagaagactcagaagagcatgaccctacctttccactggtagattcaaatgct
cagagccagatcagaaaacgcatcgtacttgagaaactgagtaaagtattgcctgccctt
ctgggccctcttcagattacattaggagatatttacacacagcttaaaaacctggtccga
actttcaggttaacaaatagaaatattatacacaaacctgcagaatggactttaattgct
atggtgttactgtcattactggccccaatccttggcattgagaagcattcacgggaaaat
gtgtttacccagttcttagccacactgctgagtgaattagatttaaagaatgaagacctt
gaaagtttaaccatcatatttagaacaagctgtcaaccaaaatga
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