Ochotona princeps (American pika): 101520018
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Entry
101520018 CDS
T07609
Symbol
TRIM72
Name
(RefSeq) tripartite motif-containing protein 72
KO
K12036
tripartite motif-containing protein 72
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101520018 (TRIM72)
04121 Ubiquitin system [BR:
opi04121
]
101520018 (TRIM72)
Membrane trafficking [BR:
opi04131
]
Exocytosis
Others
Others
101520018 (TRIM72)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101520018 (TRIM72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-RING_6
TRAF3_RING
U-box
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
101520018
NCBI-ProteinID:
XP_004587212
LinkDB
All DBs
Position
6:complement(24408518..24414897)
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AA seq
368 aa
AA seq
DB search
MSAAPGLLHQELSCPLCLQLFDAPVTAECGHSFCRSCLTRVAGEPAADGTVNCPCCQAPT
RPQALSTNLQLARLVEGLAQVPQGHCEEHLDPLSIYCEQDRVLVCGVCASLGSHRGHRLL
PAAEAHSRLKKYCLVTSRLQKTMAESPLPARLDIQLPIISDDFKFQVWRKMFRALMPELE
ELTFDQSSAHPSLVVSSCGRRVECSEQKAPPAAEDPRQFDKAVAVVAQQLLAEGEHYWEV
EVGDKPRWALGVMAAEASRRGRLHAVPSQGLWLLGLRDGKTLEAHVEAKEPRALRAPERR
PTRLGLYLSFADGVLAFYDASNADALELLFAFHERLPGPVYPFFDVCWHDKGKNAQPLLL
VGREGQEA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgcacccggcctcctgcaccaggagctgtcctgcccgctgtgcctgcagctg
ttcgatgcgcccgtgacggccgagtgcggacacagcttctgtcgctcctgcctgacccgt
gtggccggggagccggcggctgacggcactgtgaactgcccctgctgccaggctcccacg
cggccgcaggcgctcagcaccaacctgcagctggcacgcttggtggagggactggcgcag
gtgccgcagggccactgcgaggagcacctggacccgctgagcatctactgcgagcaggac
cgtgtgctcgtgtgcggcgtgtgcgcctcgctcgggtcgcaccgtggccaccgcctgctg
cccgctgccgaggcccactcgcgcctcaagaaatactgcctggtgaccagcaggctacaa
aagaccatggcagaatcacccctgcctgcccgactggacatccagctgcctatcatttcg
gatgacttcaagttccaggtgtggaggaagatgttccgagctctgatgccagaattggag
gagctgactttcgaccaaagctcggcgcacccgagcttagtggtgtcatcctgtggtcgc
cgggtggagtgttcggagcagaaggcgccgcccgccgcggaggacccacgccagttcgac
aaggcggtggccgtcgtggcgcagcagctgctggcggaaggcgagcactattgggaggtg
gaggtgggcgacaagccgcgctgggcactgggcgtgatggccgccgaggccagccgcagg
ggccgcctgcacgccgtgccctcgcagggtctgtggctgctggggctgcgcgacggcaag
accctggaggcgcacgtggaggccaaggagccgcgcgcgctgcgcgccccggagcggcgg
cccacgcgtctgggcctctacctcagcttcgccgacggcgtcctcgccttctacgacgcc
agcaacgccgacgcgctcgagctgctctttgcctttcacgagcgcctgccggggcccgtg
taccccttcttcgatgtgtgctggcacgacaagggcaagaatgcgcagccgctgctgctc
gtggggcgcgaaggccaggaagcctga
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