Ochotona princeps (American pika): 101520040
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Entry
101520040 CDS
T07609
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101520040 (TRAPPC10)
Membrane trafficking [BR:
opi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101520040 (TRAPPC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
101520040
NCBI-ProteinID:
XP_004594143
LinkDB
All DBs
Position
14:121419941..121470925
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AA seq
1259 aa
AA seq
DB search
MAAAEEAQAPVVYTMENKPIVTCAGDQNLFTSIYPTLSQQLPREPMEWRRSYGRAPKMIH
LESSFVQFKEELLPREGNKALLTFPFLHVYWTECCDTEVYKATVKDGLSKWQSILKAHGS
VDWLIVVVENDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQESWN
AFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFE
DALVQYDELDALFSQYVVNFGAGDGANWLAYFCQPVRSWSGLVLRRPIDMEKRELVQRRE
ATLLDLRSYLFSRQCTLLLFLQRPWEVAQRALELLHSCVQELRLLEVSVPPGALDCWVFL
SCLEVLQRIEGCCDREQVDSNIAHMVGLWSYATEKLKSLGYLCGLVSEKGPNSEDLNRTV
DLLAGLGAERPETANAAQSPYKKLREALSSVEAFEKHYLDLSHATIEMYTSIGRIRSAKL
VGKDLAEFYMRKKSPQKAEPYLQGALKNYLAEGWALPVTHTRKQLAECQKHLGQVENYLQ
SSSLLASDGHLTQEEREHFCQEILSFAQQPPDSPGHRVVLPMHSFAQLRDLHFDPANAVV
HVGGVLSVEMTLCSQMPVPVHVEQLAVSVHFSIEKNNYRKTAEWLTKHKTSNGLISFPAE
PTTLPASQPSLPALELHEVFERSPSDNALSTTGIICRNVHLLLRRQESGVSLDTPTGLSL
EDGPHMLRCHHVTLEPGANRVTFQTQAKEPGTYTLRQLWAVVGRVCFALPHIHPPVQYDV
YSQEPQLHVEPLADSLLAGIPQKVKFTVTTGHYTVKAGDSLQLSNTEAMLILGQAQSRAV
IYSNSREKCSEAWLRIQSSDKVTSISLPAAPAYHAIEFELDVLSVPPAPASPGDRDMLGT
PEPPAKHRDRPKAGLCMASTDHKVSIDCPWSIYSTVIALTFSVPLRTTHALLSAGTRKYV
QVCVQNLSELDFELSDCDLTHTGDGAALQLVPLNTQCQQRIYSQQSVFFVWELKWTQEPP
PALHCQFSVGFSPASQERLSIPLKPYTYEFHVENFFTLYKVQAAIAPPAGLEFCRTGSLC
ALEVCITRLADLLEVDRDEALTEADSHFTTRLMYEVVDNSSSWAVCGKSCGVICMPVAAQ
ATHRVHLEVMPLFAGYLPLPNVRLFKYLPHHSAHASQLDADSWIENDTLSVDKHGDEQLD
SGSVKGRGSVHSAASGEHKGLPMPRLQALPAGQVFNSSTGAQVLVIPSQDHHVLEVSVT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggctgaggaggcgcaggcgcccgtggtctacaccatggagaacaagcccatc
gtgacctgtgctggagatcagaatttgtttacctccatttaccccacactgtcacagcag
cttccgagggagccgatggaatggaggaggtcctatggccgggcgcccaagatgatccac
ctggagtccagcttcgtgcagttcaaggaggagctgctgcccagggaggggaacaaggcc
ctgctcaccttcccgttcctgcatgtctactggaccgagtgctgcgacactgaagtgtat
aaagccaccgtgaaggatgggcttagcaagtggcagagcatcctgaaggctcatggctct
gtggactggctcatagtggtagtggaaaacgatgccaagaaaaaaaacaaaaccaacatc
ctgccccgcacttccattgtggacaaaataagaaacgatttttgtaataagcagagtgac
aggtgtgttgtgctctccgaccccctgaaggactcctcccgcactcaggaatcctggaat
gccttcttgaccaaactcaggacgttgcttcttatgtcttttaccaaaaacctaggcaag
tttgaggatgacatgaggaccttgagggagaagaggaccgagcctggctggagcttttgt
gaatatttcatggttcaggaggagctggcgtttgtcttcgagatgctgcagcagttcgaa
gacgccctggtgcagtatgacgagctggatgcactcttctcgcagtatgtcgtcaacttc
ggtgctggcgatggggccaactggctggcctacttctgccagcctgtgaggagctggagc
ggcctggtcctgcgcaggcccatcgacatggagaagcgggagctggtgcagaggcgggag
gccacgctgctcgacctgcgcagctacctgttctcgcgccagtgcacgctgctgctcttc
ctgcagaggccctgggaggtggcccagcgcgccctggagctgctgcacagctgcgtgcag
gagctgcggctgctcgaggtctccgtgccgcccggcgcgctcgactgctgggtgttcctg
agctgtctggaggtgctgcagaggatagaaggctgctgcgaccgggagcaggtggactcc
aacattgcccacatggtggggctgtggagctacgccacggagaagctcaaatccttgggc
tatctgtgtggactcgtgtcagaaaagggcccgaattcagaagacctcaacaggacagtg
gatctgctggcaggcctgggagcggagcggcctgaaacggccaatgcagctcagagtccc
tacaagaagctcagagaagccctgtcttccgtggaggcgtttgaaaagcactatttagac
ctgtcccacgccaccattgagatgtacacgagcatcgggaggatccgctctgccaagctg
gttgggaaagacctggctgagttttacatgaggaagaagtccccgcagaaagccgagcca
tatctccaaggagctctgaaaaattacctggctgagggctgggctctgccggtcacgcac
acgaggaagcagctggctgagtgccagaagcacctggggcaggttgagaactaccttcag
tccagcagcctcctggccagcgacggccacttgactcaggaggagcgggaacacttttgc
caggagatcctgagttttgcccagcagccgccagacagcccaggtcacagggtagtgctg
cccatgcattcctttgcacaactcagagatctgcactttgaccctgctaatgccgtggtg
cacgtgggtggtgtcctgtccgtggagatgaccctgtgcagtcagatgcctgtgcctgtc
cacgtggagcagctcgcggtcagtgtccacttcagcatcgagaagaacaactaccggaag
acggccgagtggctcaccaagcacaagacgtccaacgggctcatcagcttccctgccgag
cccacgaccctgcccgcctcgcagcccagcctgcccgcgctggagctgcacgaggtgttt
gagaggagcccttccgacaacgccttgagcaccacgggcatcatctgtaggaacgtccac
ctgctgctgaggaggcaggagagcggcgtgtccctggacacgcccacgggcctgagcctg
gaggacgggccacacatgctacgctgccaccacgtgacgctggagccgggggccaacagg
gtcaccttccagactcaggccaaggagccaggaacctacacgctgcggcagctgtgggcc
gtggtaggccgcgtgtgctttgcgctcccgcacatccacccccctgtgcagtacgacgtg
tactcccaggagccccagctgcacgtggagccgctggctgatagccttctggccggcatc
cctcagaaagtcaagttcacagtcaccaccggccactacacggtgaaggcgggggacagc
ctgcagctgagcaatacggaagccatgctcatcctgggccaggcgcagagcagggctgtc
atctattccaactcgagagagaagtgctccgaagcgtggctgcggatccagtcttccgac
aaggtcaccagcattagcctgcccgccgctcctgcctaccatgccattgagttcgagctg
gacgtcctctctgtgcctccagctcctgccagccctggggacagagacatgctggggaca
ccagagccccctgccaagcacagggacaggccaaaggctggcctctgcatggcctccaca
gaccacaaggtgtccatcgactgcccgtggtccatctactccactgtcattgccctgacc
ttcagcgtgcccttgaggaccacgcacgccctgctgtcggctggaacccggaagtatgtc
caggtgtgtgtccagaatctgtctgagctggacttcgagctgtcagactgtgacctcaca
cacaccggagatggcgccgccctgcagctggtgccgctcaacacgcagtgccagcagcgc
atctacagccagcagtcggtgttctttgtctgggagttgaagtggacacaggagccgccc
cccgctctgcactgccagttctccgtgggcttttccccggcttcgcaggagcggctgtct
atccccttaaagccgtacacttatgagtttcacgtggagaatttttttacactgtacaag
gtacaggccgccattgcgccgccagcggggctggagttctgccgcacgggctcgctgtgc
gccctggaagtgtgtatcacgcggctcgctgacctgctggaggtggaccgggacgaggcg
ctgaccgaggctgactcgcacttcaccacgcggctcatgtacgaagtggtcgacaacagc
agcagctgggccgtgtgcggcaagagctgtggtgtcatctgcatgcccgtggccgcccag
gccactcacagggtgcacctggaagtgatgccacttttcgcaggctacctgcccctgccc
aacgtcaggctgttcaagtacctgccccatcactccgcccacgcctctcagctggacgct
gacagctggatagagaatgacaccctgtcggtggacaagcacggggacgagcagctggac
agcggcagcgtcaagggcagaggcagcgtgcactcggccgcgagcggcgagcacaagggc
ctgcccatgccccggctgcaggcgctccccgcgggccaggtcttcaactccagcacgggt
gcgcaggtcctggtcatccccagccaggaccaccacgtgctggaagtcagtgtcacgtga
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