Ochotona princeps (American pika): 101520070
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Entry
101520070 CDS
T07609
Symbol
TAF1A
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101520070 (TAF1A)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101520070 (TAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
TPR_14
NEW1_HB
Motif
Other DBs
NCBI-GeneID:
101520070
NCBI-ProteinID:
XP_004578961
LinkDB
All DBs
Position
16:complement(30807853..30832694)
Genome browser
AA seq
404 aa
AA seq
DB search
MSDFSEEFTRPASEDEQGEAAVLAGTGMHYPWLQKLVETVVENVDGWDSVLLFVSYQSLS
PADVMYLLVFLSRPCPMTKMPVGFVLLLQISLQHALYLVHHGMLEDANRNLTQAETWRYG
EKSSSQETLINLVQAYKGLLDYYAWSEKKMELSKLDKNDYSYGAATRNVLSLSCKTSASL
CALLKTPGVWDPFVKSYVEMLEFRGDHEEARKVLTNYAYDDKFPSNPNAHIYLYNFLKRE
KAPRAKLLSVLKILYQIVPSHKLMLEFHTLLRKSENEEHHKLGLEVLFGVLDFAGCTKNV
TAWKYLAKYLKQILMQNHRAWVQEEWNSRKNWWPVFHFSYFWAKSDWKEDTALACEKAFV
AGMLLGKGCRYFRYISKQDHQMLRKKIKRMKKSVKKYSIVKPGH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcagtgaagaattcacaaggccagcatcggaggacgagcagggggaagcg
gccgtgcttgccggtactggaatgcattatccttggcttcaaaagctggtagaaactgtg
gtggagaatgttgatggctgggacagtgtcctgttatttgtatcctaccaaagtcttagc
ccagcagatgtcatgtatttactggtctttttgagtcgtccctgtccaatgactaaaatg
cccgtgggctttgtcttactattgcagatctccttacaacatgcattgtatcttgtacat
catggaatgctggaggatgcaaacagaaacctcactcaggcagagacatggagatatggt
gaaaagtcgtcttcccaggaaacattaatcaaccttgttcaggcctacaaagggcttttg
gattattatgcttggtcagaaaagaagatggaattatcaaagcttgataaaaatgattac
tcttatggcgctgcaacccggaatgtgctcagcctcagttgcaagacatctgcaagtctg
tgtgcattgcttaaaactcctggagtttgggacccatttgtcaagagttatgtagagatg
ctggaatttcgtggtgatcacgaagaagcccgaaaggtcctcactaattatgcatatgat
gacaagtttccctcaaatccaaatgcccatatctatttgtacaacttcctgaagagggag
aaggcaccaagagcgaaactgctaagtgtgctaaagatattgtatcagattgtaccatct
cataagctgatgttagaattccatacattacttagaaaatcagaaaacgaagaacaccat
aaactggggttggaagttttgtttggagtcttagattttgctgggtgcacaaagaatgta
actgcttggaaatatttggcaaaatatctgaagcagattttaatgcagaatcaccgtgca
tgggttcaagaagagtggaactccaggaagaactggtggccagtttttcactttagctac
ttttgggcaaaaagtgattggaaagaagatacagctttggcctgtgagaaagctttcgta
gctggaatgctgttaggaaaaggttgtagatattttcgatacatctcaaaacaagatcat
cagatgttaaggaaaaaaattaagcgcatgaagaaatcagtgaaaaaatacagtattgta
aaaccaggacactga
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