Ochotona princeps (American pika): 101520086
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Entry
101520086 CDS
T07609
Symbol
SRBD1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
opi
Ochotona princeps (American pika)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
HHH_6
HHH
NMB0315_dom_I
DASH_Duo1
Spectrin_SESTD1
Motif
Other DBs
NCBI-GeneID:
101520086
NCBI-ProteinID:
XP_004582838
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All DBs
Position
2:complement(35802455..36007533)
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AA seq
994 aa
AA seq
DB search
MSSLPRRAKVQAQTVTFKDEFSSSSELLSDSEDDKEDSIWEPQKKVHRICKKPIAKEPKK
PKEPKEPKEPKPKRVPRAKKNTSKDVAVKEELNSSVAIADVNVENRKNKLDTAGTLKTAK
TKQISAQRTKKLKVEETNKASDLEGVNNRTETPSTSTVWEGTCKKEENEDDFTFGQSPLK
KMKTETCPQGQPVKFPANANSIKEEVGMNWDIVQVLAERTNIELWVCANIIRLFNDDNTI
PFIIRYRKELINDLDADSLREIQQTLEELRSVAKKVHSTIQKIKKEGKMSESLLNALLNC
KTSEELEHVSAPYKTGSKGTKAQRAKQLGLEGAARTLLERPGELSLLSYIQPSVKGLSTL
QDVETGVQHILADMIAKDKDTLDFIRKLCQNRYICIQSSLAKVSSKKVNEKDVDKFQLYQ
NFSCNIRNIQHHQILAINRGENLKILRVKVNISDDVKNEFCRWCIRNRWRPRGFARPELM
KILYNSLDDSFKRLISPLLCREFRAKLTSDAEKESVLMFGRNLRQLLLTSPVPGRTLMGV
DPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFQKAAKIKRLLLNFNCSTVVIGNGTACR
ETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEADKEMPGLDPNLRSAVSIARRV
QDPLAELVKIEPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIA
GLNANRAKNIIEWREQNGPFINREQLKKVKGLGPKSFQQCAGFIRINQDYIRTFCSNQQT
DSSGQIQGAAVTSSAGVEITNEKQGKKKSKTTMNIVLKPNALDQTCIHPESYDIAMRFLS
SFGGTLCEIGKPEMQQKINSFLEKEGIEKTAQRLQTTVPTLQVIVDGLSQPESFDFRTDF
DKPDFKRSIVCLEDLQVGTVLTGKVENATLFGIFVDIGVGKTGLIPIRNVTEEKLSKTKK
RRSLGLGPGERVEVQVLDIDIPRSRITLDLIRVL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattgccaagaagagcaaaagtgcaggcccagactgtgacattcaaagatgaa
ttttcttcctcctctgagttattgtcagactctgaagatgacaaggaagatagcatctgg
gagccccaaaagaaagtccacaggatctgtaaaaagcccattgcgaaggaaccgaagaaa
cccaaggaacccaaggaacccaaagaacccaaaccaaagagagtgcctcgggcaaagaag
aacacatccaaagatgtggctgtcaaggaggagctgaatagttctgtggctattgctgat
gttaatgtagaaaacaggaaaaataaattggatactgccgggactctcaaaacagcaaag
acgaagcagatttcagctcagaggaccaagaagttgaaagttgaagaaaccaacaaagcc
agtgacttagagggtgttaataacaggacagagactccatccacaagcaccgtgtgggaa
ggtacctgcaaaaaggaggagaatgaagatgactttacattcggccagtcccctttaaag
aaaatgaagactgaaacgtgtcctcaggggcagcctgtcaagtttccagcaaatgccaat
agtatcaaagaggaggtgggcatgaactgggacattgtacaggttttagctgagagaact
aatattgaactttgggtttgtgccaacatcatccgtctgtttaatgatgataacacaatt
cccttcatcatacgttaccgtaaagagctcatcaatgaccttgatgctgattccttaaga
gaaattcaacaaacccttgaggagcttcggtctgttgccaagaaggttcatagtacaata
cagaaaattaagaaggagggaaagatgtctgaatccttgttaaatgctttgctgaactgt
aaaacttctgaagaattggaacatgtgtctgccccatataaaactgggagcaaaggcact
aaagcccagagagcgaaacagttgggattggaaggagcagccaggacactgctcgagcgg
ccaggggagctcagtctgctgtcttacattcaacccagcgtgaaagggctttcaacgctg
caggatgttgaaacaggagtacagcatattttagcagacatgattgcaaaagacaaagac
acacttgacttcattcggaaattgtgccaaaatagatatatttgtatacaatcgtctctg
gcaaaagtctcctcaaaaaaggtaaatgagaaagatgtcgacaagtttcagctctatcaa
aatttttcatgcaatataagaaacatccagcatcatcagattctggcaattaaccgtgga
gaaaatttgaagatattgagagtcaaggttaacatttctgatgatgtgaaaaatgaattc
tgtaggtggtgcatccgaaacaggtggaggccacgtggttttgcaagaccagagttaatg
aagattttatataattcactggatgattcctttaaacgcctcatttctcctcttctctgt
agagagttcagagccaaactaacatcagacgcagagaaggaatcagtgttgatgtttgga
cggaaccttcgccagctccttctaacaagccctgtcccaggacgtactctgatgggagtg
gatcctggttacaagcatggttgcaaattagctataatttctcctaccagtcagatactt
catactgatgtggtttacttgcattgtggacaaggtttccaaaaggcagcgaaaataaag
aggcttttgctgaatttcaactgcagcacagtggtgattggaaatggaactgcctgccgg
gaaacagaagcttactttgctgacctgataatgaaaaattactttgcaccactggatgtt
gtttactgtattgtgagtgaagcaggagcctccatctacagtgtcagccctgaagccgac
aaagagatgccagggctggatcctaacttgagaagtgcagtttccatagcaaggcgtgta
caggatccattagccgagctagtgaaaattgagccgaagcacattggagttggaatgtac
cagcatgatgtatcccagacgttactcaaggcaacactggacagtgttgtagaagaatgt
gtcagctttgtgggagtagatattaacatctgttcagaagttttgttaaggcatattgca
ggactcaatgccaacagagccaaaaacattattgaatggcgagaacaaaatgggcccttc
atcaaccgagagcagctgaagaaagtgaaagggctgggtccaaaatccttccaacaatgt
gctgggttcatcagaatcaaccaggattacattcgaacattttgcagcaatcagcagact
gattcttcaggccaaattcaaggagctgctgtgacatcttcagcaggtgttgagatcaca
aatgagaaacaaggcaaaaagaagagtaaaactacaatgaatattgtgctgaagccaaat
gcattggaccaaacttgtattcatccggaatcatatgacatagcaatgaggtttttatca
tcctttggcggtacactgtgtgagattggaaagcctgaaatgcaacaaaaaataaattca
ttccttgaaaaggaaggaatcgagaaaaccgcacaaagattgcaaacaacagtccctacc
ttgcaagtcattgtagatggtctcagtcagcctgaaagctttgactttcgaacagatttt
gataaacctgacttcaagagaagcatagtttgcctggaagatctgcaggttgggacagtt
cttacgggcaaagtcgagaatgccactctgtttggaatttttgtggatataggagtagga
aaaacagggctgattccgattcgaaatgtaacagaagaaaaactttccaaaacgaagaag
agaaggagtcttggtttgggccccggagaaagagtggaagtccaagtgctcgacattgac
atcccccgatccaggatcactctggacctcatccgggtgttgtga
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