Ochotona princeps (American pika): 101520103
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Entry
101520103 CDS
T07609
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101520103 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101520103 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
opi03310
]
101520103 (NR1D2)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101520103 (NR1D2)
Nuclear receptors [BR:
opi03310
]
1. Thyroid hormone like
1D. Rev-Erb
101520103 (NR1D2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
101520103
NCBI-ProteinID:
XP_004588347
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Position
14A:complement(11749015..11765440)
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AA seq
503 aa
AA seq
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MKASKSNAPGITKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNI
QYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAM
KTMMNSQFSGHLQNEALVEHREQTALPPQEQLRPKPQLEQESLTSSPPPSSDFAKEEVIG
MVTRAHKDTFMYNQEQRENSAESMQLQRERMPKNMEPYNLNHDHCGSGLSSHFTCSESQQ
HLNGQYKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKISYLCNT
GGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVS
LLKAGTFEVLMVRFASLFDAKERTVTFLSGKRYSVDDLHSMGAGELLNSMFEFSEKLNAL
QLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLL
KLPDLRSLNNMHSEELLAFKVHP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagcaagtcgaatgcaccagggataacaaaaagtcacagtggtgtgacaaag
ttcagtggcatggttttactgtgcaaagtctgtggggatgtggcgtcaggattccactat
ggagtgcacgcgtgtgaaggctgcaagggtttcttccggagaagtattcaacaaaacatc
cagtacaagaagtgcctgaagaatgaaaactgttccataatgaggatgaacagaaacaga
tgtcagcagtgtcgcttcaagaagtgtctgtctgttggaatgtcgagagatgctgttagg
tttggtcgcattcctaagcgtgagaaacaaaggatgctaattgaaatgcaaagtgcgatg
aagaccatgatgaacagccagttcagtggtcacttgcagaatgaagcattagtagaacac
cgggagcagacggccttacctccccaggaacagctgcgacccaagccccagctggagcaa
gaaagcctgacaagctctcctcctccctcttctgattttgcaaaggaagaagtcattggc
atggtgacccgagcccacaaggatacctttatgtataatcaagagcagcgagaaaactca
gcggagagcatgcagctccagagagaacggatgcccaagaacatggagccatataattta
aatcatgaccattgtggcagtgggcttagcagtcattttacctgtagtgagagccagcag
catctcaatggacagtataaagggaggaacataatgcattacccaaatggtcatgccatt
tgtattgcaaatggacattgtatgaacttctccaatgcttatactcaaagagtatgtgat
agagttccaatagatggattttctcagaatgagaacaagattagttacctgtgcaacact
ggagggaggatgcatctggtttgtccaatgagtaaatctccatatgtggatccacataaa
tcggggcatgaaatctgggaagaattttcgatgagcttcacaccagcagtgaaagaagtg
gtggaatttgcaaagcgcatccctgggttccgagatctctctcagcatgaccaggtcagc
cttctgaaggctggaacttttgaggttttaatggtacggtttgcatcactgtttgatgcc
aaggagcgtactgtcacctttttaagcgggaagaggtacagtgtggatgatttacactcc
atgggagcaggggagctgctcaactccatgtttgaatttagcgagaagctgaacgccctc
caactcagtgatgaagagatgagtttgtttacagcagttgtcctggtctctgcagatcga
tctggaatagagaatgtcaactctgtggaggctttgcaggaaacccttatccgtgcactg
aggaccttaatcatgaaaaaccacccaaatgaggcctctatttttacaaagctacttctc
aagttgccagatcttcgatctttaaacaacatgcattctgaggagctgctggcctttaaa
gtgcacccttaa
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