Ochotona princeps (American pika): 101520309
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Entry
101520309 CDS
T07609
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
opi04940
Type I diabetes mellitus
opi05134
Legionellosis
opi05152
Tuberculosis
opi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101520309
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
101520309
05152 Tuberculosis
101520309
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101520309
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
101520309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101520309
03110 Chaperones and folding catalysts [BR:
opi03110
]
101520309
03029 Mitochondrial biogenesis [BR:
opi03029
]
101520309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101520309
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101520309
Messenger RNA biogenesis [BR:
opi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101520309
Chaperones and folding catalysts [BR:
opi03110
]
Heat shock proteins
HSP60 / Chaperonin
101520309
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101520309
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101520309
Exosomal proteins of other body fluids (saliva and urine)
101520309
Exosomal proteins of breast cancer cells
101520309
Exosomal proteins of colorectal cancer cells
101520309
Exosomal proteins of bladder cancer cells
101520309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101520309
NCBI-ProteinID:
XP_036348833
LinkDB
All DBs
Position
6:complement(34961728..34963415)
Genome browser
AA seq
448 aa
AA seq
DB search
MDRVVLVCEQSWRSPKVAKDGVTVAKSIDLKDQYKNVAAKLVQNVANNTNEEAGDGTTTA
TILARSIAKEGFEKINKGANPVAIRRSVMLAVDAVISELKKQSQPVTTPEEIAQVATISA
NGDKEIGNIISDAMKKVGRKGVITVKDGKTLNAELEIIEGMKFDRGYISPDFINTLKGKK
CEFQDAYVLLSEKKISSVQSIVPALEVANAHRKPLVIIAEDVVGEALSTLVFNKLKVRLQ
VVAVKAPGLGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDIQPHDLGKLGEVIVTKDDVM
LLKGKGDKAQIECDIEQLDVTTSEYEKEKLNERLAKLSDGIAVLKVGGTSDVEVNEKKDR
VTDALNATRSSVEEGIVLGGGCALLWCIPALDSLAPANEDQKICKDIIRRTLKIPAMTFA
KNAGVEVGPADRPALLAPSQVQSSILVP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacagagtggttcttgtgtgtgaacagagctggcggagtcctaaagtagcaaaagat
ggtgtaactgttgccaagtcaattgacttaaaagatcaatataaaaacgttgcagctaaa
cttgttcagaatgttgccaataacacaaatgaagaagctggggatggcaccaccacagct
actatactggctcgctctattgccaaagaaggctttgagaagattaataaaggtgctaat
ccagtggcaatcagaagaagtgtgatgttagctgttgatgctgtaatttctgagcttaag
aaacagtcacaacctgtgacgacccctgaagaaattgctcaggttgctacaatttctgca
aatggagacaaggagattggcaatatcatttctgatgcgatgaagaaggttggaagaaaa
ggtgtcatcacagtaaaggatggaaaaacactgaatgctgaattagaaattattgaaggt
atgaagtttgaccgaggctatatttctccagactttattaatacattaaaaggtaagaaa
tgtgaattccaagatgcctatgttctgctgagtgaaaagaaaatttctagtgtccagtcc
attgtacctgctcttgaagttgccaatgctcaccgtaagcctctggtcataattgctgaa
gatgttgttggagaagctctgagtacattggtttttaataagttaaaagttcgtcttcag
gttgtagcagtgaaagcaccaggtttaggtgacaacagaaaaaatcagcttaaagacatg
gctattgctactggtggtgcagtatttggagaagaaggattgaccttgaatcttgaagat
attcagcctcatgacttgggaaaacttggagaggtcattgtgactaaagatgacgtcatg
cttttgaaaggaaagggtgacaaggctcaaattgaatgtgacatcgagcagctagatgtc
acaactagtgagtatgaaaaggaaaagctgaatgaacggctggcaaagctttccgatgga
attgctgtgctgaaggttggtgggacaagtgatgttgaagtaaatgaaaaaaaagacaga
gttacagatgctctgaatgctacaagatcttctgttgaagaaggcattgtactgggaggt
ggatgtgccctgctttggtgcattccagccttggactcattagctccagctaatgaagat
caaaaaatttgtaaagacattattagaagaacactcaaaattccagcaatgacttttgct
aagaatgcaggtgttgaagtaggtcctgctgaccgccctgccctgctggcccccagccag
gtccagagttctattttggtgccatga
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