Ochotona princeps (American pika): 101520325
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Entry
101520325 CDS
T07609
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi01522
Endocrine resistance
opi04330
Notch signaling pathway
opi04658
Th1 and Th2 cell differentiation
opi04919
Thyroid hormone signaling pathway
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05206
MicroRNAs in cancer
opi05207
Chemical carcinogenesis - receptor activation
opi05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101520325 (NOTCH2)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
101520325 (NOTCH2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
101520325 (NOTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101520325 (NOTCH2)
05206 MicroRNAs in cancer
101520325 (NOTCH2)
05207 Chemical carcinogenesis - receptor activation
101520325 (NOTCH2)
09162 Cancer: specific types
05224 Breast cancer
101520325 (NOTCH2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101520325 (NOTCH2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
101520325 (NOTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Elf-1_N
EssA
Motif
Other DBs
NCBI-GeneID:
101520325
NCBI-ProteinID:
XP_012781463
LinkDB
All DBs
Position
13:107665417..107795882
Genome browser
AA seq
2457 aa
AA seq
DB search
MRKNQFENFALQCRDGYEPCVNKGMCVTYHNGTGYCECPEGFLGEYCQHRDPCEKNRCQN
GGTCVAQATLGKATCRCAPGFTGEDCQFSTSHPCFVSRPCQNGGICHTRGRDTFECTCQV
GFTGKLCQWTDACLSHPCANGSTCTIVANQISCKCLAGFTGQRCETDVNECDVPGRCQHG
GTCLNLPGSYQCQCPQGFTGQHCESPYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGN
TCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTC
TNRNGDYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHL
DDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECTMANSNPCEHAGKCMN
TDGAFYCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEI
NECHSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYE
CQCATGFTGVLCGENIDNCDPDPCHHGQCQDGIDSYTCLCNPGYMGAICSDQIDECYSSP
CLNEGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASSPCVHGVCVDGINRYNCVCSPGYT
GQRCNIDIDECASNPCRKGATCVNDVDGFRCLCPEGPHHPSCYSQVNECLSNPCIHGNCT
GGLSGYKCLCDAGWVGVNCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGHNCQVN
IDECASNPCLNQGTCFDDISGYTCQCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPDFE
SYTCVCAPGWQGQRCTIDVDECVSKPCLNHGVCHNTQGSYMCECPPGFSGMDCEEDIDDC
LTNPCQNGGSCMDRVNTFSCLCLPGFVGEKCQTDMNECLSEPCKNGGTCSDYVNSYTCKC
PAGFDGVHCEHNIDECTESSCFNGGTCIDGINSFSCLCPVGFTGPFCLHEINECSSNPCL
NEGTCVDGLGTYRCICPLGYTGKSCQTIVNLCSRSPCRNGGTCVQDKAEARCLCPSGWAG
AYCDVPSVSCETAALRRGVSVAHLCQHSGVCIDAGTTHHCQCPFGYTGSYCEEQLDECAS
NPCQHGATCSDFIGGYGCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPP
GTRGLLCEENIDDCAGGPHCFNGGQCVDRIGGYSCRCLPGFAGERCEGDINECLSSPCSS
EGSLDCIQLTNNYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNTPDGFICRCPP
GFSGARCQSSCGQVKCRRGEQCVHTASGPRCFCPNPQDCDSGCASSPCQHGGSCYPQRQP
PYYSCRCAPPFWGSHCELYTAPTSSPPATCLSQYCADKARDGVCDEACNSHACQWDGGDC
SLTMEDPWANCSSPLPCWDYINNQCDELCNTAECLFDNFECQGDSKTCKYDKYCADHFKD
NHCDQGCNSEECGWDGLDCAADRPENLAEGMLVIVVLMPPEQLLQDSRSFLRALGTLLRT
NLRIKQDSQGNMMVYPYYGEKSAAMKKQRMARRSLPNEQEQEVVGSRVFLEIDNRQCVQD
SDQCFKNTDAAAALLASHAIQGTLSYPLVSVVSESLTPKGTQMLYLLAIAVVIILFIILL
GVIMAKRKRKHGSLWLPEGFTLRRDTSNHKRREPVGQDAVGLKNLSVQVSESNLIVSGTS
GHWVDDEGPQPKKAKAEDEALLSEEDDPIDRRPWTQQHLEAADIRRTPSLALTPPQAEQE
VDVLDVNVRGPDGCTPLMLASLRGGSSDVSDEDEDAEDSSANIITDLVFQGASLQAQTDR
TGEMALHLAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVAADAQGVFQILIRNRVT
DLDARMNDGTTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLL
LLKNGANRDMQDNKEETPLFLAAREGSYEAAKILLDHFANRDITDHMDRLPRDVARDRMH
HDIVRLLDEYNVTPSPPGTMLTSALSPVICGPNRPFLSLKHTPMGKKPRRPNAKSAIPTS
LPNLAKEAKEAKGSRRKKSLSEKVQLSESSVTLSPVDSLESPHTYVSDTTSSPMITSPSI
LQASPNPMLATAAPTAQVHAQHALSFSNLHEMQPLAHGGANTVLPSVSQLLSHHHIVPPG
NGSAGSLGRLHPVTVPADWMNRVEMNETQYNEMFGMVLAPTEGTHPGITPQSRPPEGKHI
APPREPLPPIVTFQLIPKGSIGQSTGASQTQSSCPPAVAGPLPTMYQIPEMARLPGVAFP
TAMMPQQEGQVAQTILPAYHPFPASVGKYPTPPSQHSYASSSAAERTPSHSGHLQGEHPY
LTPSPESPDQWSSSSPHSASDWSDVTTSPTPGGAGGGQRGPGTHMSEPPHNNMQVYA
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaatcagtttgagaactttgctttgcaatgtcgagatggctatgagccctgt
gtgaacaaaggaatgtgtgttacttaccacaatggcacaggatactgcgagtgcccagag
ggcttcttgggagagtattgtcaacatcgagacccctgtgaaaagaatcgctgtcagaat
ggtgggacctgtgtggcccaggccacgttgggaaaagccacatgccgatgtgctccaggg
ttcacaggagaggactgccagttctcaacgtctcacccctgcttcgtgtctcgcccttgc
cagaatggaggcatctgccacacacgtggccgggatacctttgagtgcacgtgccaggtc
ggctttacagggaagctgtgccagtggactgatgcctgcctgtctcatccttgtgcaaat
ggaagtacctgcaccattgtggccaaccagatctcctgcaaatgcctcgcaggcttcaca
gggcagaggtgtgagactgatgtcaatgagtgtgatgttccaggacgctgccagcatggc
gggacctgcctcaacctgcctggttcctaccagtgccaatgtccacagggcttcacaggc
cagcactgtgaaagcccctatgtgccttgtgccccgtccccctgtgtcaatggaggcacc
tgccggcagactggagacttcacttttgagtgcaactgccttccaggttttgaagggaac
acctgtgaacggaacatagatgactgccctaaccacaagtgtcaaaatggaggggtttgt
gtggatggagtcaacacttacaactgccgctgcccgccgcagtggacagggcagttctgt
acagaggacgtggatgagtgcctgctgcaacccaacgcctgtcagaacgggggcacctgt
acaaaccgcaacggggactacggctgtgtgtgtgtcaacggctggagcggggatgactgc
agtgagaacatcgacgactgtgccttcgcctcctgcactcccggctccacctgcattgac
cgcgtggcttccttctcctgcatgtgtccagagggaaaggcaggtctcctgtgtcatctg
gacgatgcatgcattagcaacccttgccacaagggggcactgtgtgacaccaaccctctg
aatgggcagtatatttgcacctgcccacagggctacaaaggtgctgactgtaccgaagat
gtagatgagtgtaccatggccaacagcaatccctgtgagcatgcaggaaaatgcatgaat
acggatggtgccttttactgcgagtgtctaaagggctatgcagggcctcgctgcgaaatg
gacatcaacgagtgccattcagatccctgccagaatgatgccacctgcttggataagata
ggaggcttcacgtgtctgtgcatgccaggtttcaaaggtgtgcattgtgaattggagata
aatgaatgtcacagcaacccttgcgtcaacaacggacaatgtgtggataaagtcaatcgc
ttccagtgtctctgtccacctggttttacagggccggtatgccagattgatattgatgac
tgttccagcactccgtgtctgaatggggcaaagtgcattgatcacccgaatggctatgag
tgccagtgtgccacaggcttcaccggcgtgttgtgtggggagaacatcgacaactgcgac
cctgacccctgccaccacggccagtgccaggatggcattgactcctacacctgcctctgc
aaccccgggtacatgggcgccatctgcagcgaccagatcgacgagtgctacagcagcccc
tgcctcaacgaagggcgctgcatcgacctggtgaacggctaccagtgcaactgccagcca
ggcacgtcaggcgtcaattgtgagatcaactttgatgactgtgcgagcagcccgtgtgtc
catggagtctgtgtggatggaatcaatcgctacaattgtgtctgctcaccgggatacaca
gggcagagatgtaacatcgacattgatgagtgtgcatctaatccttgccgcaagggggcg
acgtgcgtcaacgatgtggatggtttccgctgcttatgccctgagggacctcatcaccca
agctgctactcacaggtgaatgaatgtctgagcaacccctgcattcacggcaactgcacc
ggaggtctcagtggatataagtgcctttgtgatgcaggctgggttggtgtcaactgtgag
gtagacaaaaatgaatgtctgtctaacccatgccagaatggaggaacttgcgacaatctg
gtgaatggatacaggtgtacttgcaagaagggttttaaaggccacaactgccaggtgaat
attgatgaatgtgcttcaaacccatgcttgaaccaaggaacctgctttgatgatataagt
ggctacacttgtcagtgtgtgctgccatacacaggcaagaattgtcagactgtcttggct
ccctgttccccaaatccttgtgagaacgctgctgtctgcaaggagtcaccagactttgag
agctacacctgtgtgtgtgctcctggctggcaaggtcagcgatgcacaattgatgtggat
gagtgtgtctcgaagccctgcctgaaccacggggtctgccacaacacacagggcagctac
atgtgcgaatgtcccccgggcttcagtgggatggactgtgaggaggacatcgatgactgc
cttaccaatccctgccagaatggaggttcctgtatggacagagtgaacactttctcctgc
ctttgccttccgggcttcgttggggagaagtgccaaaccgacatgaatgagtgtcttagt
gaaccctgtaagaatggagggacctgctccgactacgtcaacagctacacttgcaagtgt
ccggcggggtttgatggagtccactgtgagcacaacatcgacgagtgcactgagagctcc
tgtttcaatggtggcacgtgtattgatgggatcaactccttctcctgcctctgccctgtg
ggtttcactggtcccttctgcctccatgagatcaatgagtgcagctctaatccgtgcctg
aatgagggaacctgtgtcgatggcctgggcacctaccgctgtatctgccccctgggctac
actgggaaaagctgtcagaccatcgtgaacctgtgcagccggtcaccatgtagaaacggg
ggaacttgtgtgcaggacaaagccgaggcgcggtgcctgtgtccatctggctgggctggt
gcctactgtgatgtgcctagtgtctcctgcgaaacagcagccctccgcagaggtgtgtct
gttgcccacttgtgtcagcactcaggcgtctgcatagatgctggcaccacacaccactgc
cagtgtccctttggctacactgggagctactgtgaggagcagctcgatgaatgcgcgtct
aatccctgccagcacggcgccacctgcagtgacttcatcggtggatacggatgtgagtgt
gtgccaggatatcagggtgtcaactgtgaatacgaagtggacgagtgccagaatcagcca
tgccagaatggaggcacctgtattgaccttgtgaaccacttcaagtgctcctgcccacca
ggcactcgaggcctgctttgtgaagagaacatcgatgactgtgccggtggaccccactgc
tttaatggtggtcagtgtgtggatcggattgggggctatagctgtcgctgcttgcccggc
tttgctggggagcggtgtgagggggacatcaatgagtgtctctccagcccctgcagctct
gagggcagcctggactgcatccagctcaccaataactacctgtgtgtctgccgcagcgcc
ttcaccggccgtcactgtgaaacctttgtggatgtatgtccccaaatgccttgcctgaat
ggcggcacttgtgccgtggccagcaacacgcctgacggcttcatctgtcgctgccccccg
ggattctctggggcaagatgccagagcagctgtggccaagtgaagtgtcgccgaggggag
cagtgtgtgcacacagcttcgggaccgcgctgcttctgccccaacccccaggactgtgat
tcaggctgtgccagcagcccctgccagcacgggggcagctgctaccctcaacggcagcct
ccttattactcctgccgctgtgctcctccgttctggggcagccactgtgagctctacacg
gcccccaccagcagccctcctgccacttgtctgagccagtattgcgccgacaaagctcga
gatggagtctgtgatgaggcctgcaacagccatgcctgccagtgggacggcggtgactgt
tccctcaccatggaggacccctgggccaactgctcctccccgctcccctgctgggattat
attaacaaccagtgtgatgagctatgcaacacagccgagtgcctttttgacaactttgaa
tgccaaggggacagcaagacgtgcaagtatgacaaatactgtgcggaccacttcaaagac
aaccactgtgaccagggctgcaacagcgaggagtgtggctgggacgggctggactgtgct
gctgaccgacccgagaacctggcggagggcatgttggtcattgtggtgctcatgcccccg
gaacagctgcttcaggactctcgcagcttcttgcgagccctgggcaccctgctgcgcacc
aacctgcgcatcaagcaggactcccaaggaaacatgatggtgtacccctactacggcgag
aagtctgcagccatgaagaagcagaggatggcacggagatcccttcccaacgaacaggag
caggaagtggttggctctagggtctttctggaaatcgacaaccgccaatgtgttcaagac
tcagaccagtgcttcaagaacacagatgcagcagcagctctgctggcttctcacgccatc
caggggaccctgtcatacccgctcgtgtctgtcgtcagtgaatctctgactccgaagggc
acacagatgctgtatctgctcgccatcgctgtggtcatcatcctgttcatcatcctgctg
ggggtcatcatggcaaagcgcaagcggaagcacggctctctctggctgcccgaaggcttc
actctacgccgagacaccagcaaccacaagcggcgcgagcctgtgggacaggatgcggtg
gggctgaagaatctctcagtacaagtctcagagtccaatctaattgtttctggaacaagt
ggccactgggttgacgatgaaggaccccagccaaagaaggccaaggctgaagacgaggct
ctgctgtcagaggaggatgatcccattgatcggcgcccctggacacaacagcaccttgaa
gctgcagacatccgtcggacaccatcactggccctcactcctcctcaggcagagcaggag
gtggacgtgctggacgtgaacgtccggggcccagatgggtgcaccccactaatgctggcc
tctctccgaggaggcagctccgacgtcagtgatgaagatgaagatgctgaggactcttct
gccaacatcatcacagacttggtcttccagggtgccagcctgcaggcccagactgacagg
accggcgagatggccctgcaccttgcagcccgctactcgagggctgatgctgccaagcgg
ctcctggatgcaggcgcagatgccaacgcacaggacaacatgggccgctgccctctgcat
gcagcagtggcagctgacgcccaaggagtctttcagattctgatccgcaatcgagtaaca
gatctagatgccaggatgaatgatggaaccacaccgctgatcctggctgcccgcctggct
gtggagggcatggtggccgaactgatcaactgccaagccgatgtgaacgccgtggatgac
catggaaaatctgctcttcactgggcagctgcagtcaacaacgtggaggcaactctttta
ctgttgaaaaatggagctaaccgagacatgcaggacaacaaggaagaaacgcctttgttc
cttgccgcccgggaggggagctatgaagcagccaagatcctcttggaccactttgccaat
cgggacatcacagaccacatggatcgtctcccccgcgacgtggcccgggatcgcatgcac
catgacatcgtgcgcctcctggatgaatacaatgtgacccccagtcccccgggcacaatg
ctcacctctgccctgtcacccgtcatctgcgggcccaacaggcccttcctcagcttgaag
cacaccccgatgggcaagaagcctcggcggcccaatgccaaaagtgccatccccaccagc
ctacctaaccttgccaaggaggccaaggaggccaaaggtagcaggaggaagaaatctctg
agtgaaaaggtccagctgtctgagagctcggtgacgttatcccctgttgattctctggaa
tcccctcatacatacgtttctgataccacatcctccccaatgatcacatcccccagcatc
ttgcaggcctcccccaaccctatgttggccacagcagctcccacggcccaagtccatgca
cagcatgcactgtctttctccaaccttcatgagatgcagcctttggctcatggcggagcc
aacactgtgctcccctcagtgagccagttgctctcccaccaccacattgtccccccaggc
aatggcagtgcagggagcttgggtaggctccatccagtcactgtcccagcagactggatg
aaccgtgtagagatgaatgagacccagtacaatgagatgtttggtatggtcctggctcca
actgagggcacccaccctggtataaccccccagagtaggccgcctgaggggaagcacata
gctcccccacgggagcccttaccccctattgtgactttccagctcatccccaaaggcagt
attggccagtccactggggcttcccagactcagtccagctgccctccagctgttgcaggc
cccttgcccaccatgtaccagattccagaaatggcccgtttgcctggtgtggctttccct
actgccatgatgccccagcaggaggggcaggtagctcagacaattctcccagcctatcac
cctttcccagcctctgtgggcaagtaccccacacccccttcacagcatagctatgcttcc
tcaagcgctgctgagcgaacacccagtcacagtggtcacctccagggggagcatccgtac
ctgacaccatccccagagtctcctgaccagtggtcaagttcatcaccccactctgcttct
gactggtcagatgtgaccaccagtcctactccaggaggtgctggaggtggtcagcgggga
cctgggacccacatgtctgagccaccacacaacaacatgcaggtgtatgcatga
DBGET
integrated database retrieval system
