Ochotona princeps (American pika): 101520341
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Entry
101520341 CDS
T07609
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101520341 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101520341 (XRCC4)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101520341 (XRCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
CMAS
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
101520341
NCBI-ProteinID:
XP_004586357
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All DBs
Position
11A:3931054..4101959
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AA seq
505 aa
AA seq
DB search
MGRKVSRIRLASEPGIVHFLQVSWEETVGSGFVIMLTDGQSAWTGTVSETVIAQEAEDMA
MEKEKYVKELEKALVSGAEPEDTYKFTFSKESCHFSFEKNLKDVSFRLGSFNLEKVASPT
EVIRELICFCLDSIAENQAKNEHLQKENERLLRDWNDVQERFEKCVSVKEALETDLYKRF
VLVLNEKKAKIRSLHKLLSEVQELEKNAEHVSETAACSEAIADGDAVYDASTDEECEDLA
GPSVIAAGKDDSVISSPDVIDIAPSRKRRLRMQKNLGTEPNMVPQDEHLQEKEKRLESGA
KAKRGSQALWTVGFVTTGPDNRCQEGNIDVSPETRNIILNQKGFRKPLPLACGPLEKAIK
LSPHSCLLINLMSEMSRRNCLSPRCLDLFGSHIACQSGSLSLAFWCLQQSAMAVALPQWD
SECDFHNICETGESVLACPSWQALCSWQALGFVSSPPALEVVGSVVVCVSLMLLARAERS
KPAVMGSSFTAGVEKPKAWLMLLAL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaagtaagccggatccgtcttgcctctgaacctggtatagttcactttcta
caagtgtcttgggaggaaacagtgggatctggatttgttatcatgcttacggatggtcag
tcagcatggactgggacagtttctgaaacagtgattgcccaggaagctgaggacatggcc
atggaaaaggagaaatatgttaaagaattggaaaaagcgctggtgtctggagcggaaccg
gaggatacctacaagtttaccttttctaaagagtcttgtcatttctcctttgagaaaaat
ctgaaagatgtttcattcagacttggttccttcaacctggagaaagttgcaagccccact
gaggtcattagagaacttatttgtttctgcctggactcgattgctgaaaaccaagccaaa
aatgagcacttgcagaaagagaatgaaaggcttctaagagattggaatgatgttcaagaa
cgatttgaaaaatgtgtgagtgttaaagaagctttggagactgatctgtataaacggttt
gtactggtactaaatgagaagaaagccaagatcagaagtctgcataaattgttaagtgaa
gttcaagaattagagaagaacgctgaacatgtaagtgagaccgcagcttgttctgaggcg
attgctgatggagatgcagtctatgacgcaagcactgatgaggagtgtgaggacctggct
ggtccctctgtgatcgctgcaggtaaagatgattctgttatttcaagtcctgatgtcata
gatattgccccaagtagaaagcgaaggctgcgaatgcagaaaaatcttggcacagaaccg
aacatggttcctcaggatgaacatcttcaagaaaaggagaagaggctggagtcgggagcc
aaagccaagcgtggaagccaggcactgtggactgtgggctttgtaaccactgggccagac
aaccgctgccaggaagggaacatcgatgtctctccagagactcggaatattattttgaat
cagaaggggtttaggaagcctctgcccttggcttgtgggcctttggaaaaggccataaaa
ctcagcccccattcctgcttgctaatcaacctcatgtctgaaatgtctagaagaaattgc
ctttcgccgcgctgcctcgacctttttggctcacatattgcttgccagtctggcagcctg
tcgttggctttttggtgcctacagcagtcagcaatggccgttgcccttcctcagtgggat
tctgaatgtgattttcacaacatttgtgaaacaggtgagtctgtgctggcatgcccgtcc
tggcaggcactctgctcttggcaggccctgggctttgtctcctcaccgcctgccttagaa
gtagtcggctcggtcgtggtctgtgtcagcttgatgttgttggccagagcagagcgcagc
aagcctgccgtcatgggttcctccttcacagccggggtggagaaaccaaaggcatggctt
atgcttcttgcgctgtga
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