Ochotona princeps (American pika): 101520345
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Entry
101520345 CDS
T07609
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04080
Neuroactive ligand-receptor interaction
opi04082
Neuroactive ligand signaling
opi04519
Cadherin signaling
opi04723
Retrograde endocannabinoid signaling
opi04727
GABAergic synapse
opi04742
Taste transduction
opi05032
Morphine addiction
opi05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101520345 (GABRA6)
04082 Neuroactive ligand signaling
101520345 (GABRA6)
04519 Cadherin signaling
101520345 (GABRA6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101520345 (GABRA6)
04723 Retrograde endocannabinoid signaling
101520345 (GABRA6)
09157 Sensory system
04742 Taste transduction
101520345 (GABRA6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
101520345 (GABRA6)
05033 Nicotine addiction
101520345 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101520345 (GABRA6)
Ion channels [BR:
opi04040
]
Ligand-gated channels
GABA-A
101520345 (GABRA6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101520345
NCBI-ProteinID:
XP_004587521
LinkDB
All DBs
Position
3A:complement(14412610..14434078)
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AA seq
453 aa
AA seq
DB search
MASPLTWLCIILWLGNATGKLEDEGNLFSENISRILDSLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTASSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKAQISASSPVTISKATEPLEAEI
VVRSDSKYHLKKRITSLTLPIVPSSEASKVLTRAPILPPTPVTPPPLSPTFGDTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEASNSIE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacctctgacctggctgtgcattattctatggctgggaaatgccacggggaaa
cttgaagatgagggcaacttgttctcagaaaacatcagtcggatcctggacagtctgctg
gaaggctatgataatcggttgcggccaggatttggaggtgctgtcacagaagtcaaaaca
gacatttatgtgaccagttttgggcccgtgtcagatgtggaaatggaatatacaatggat
gttttcttccgccaaacttggactgatgagagattgaaatttgggggaccaactgagatt
ctgagtttgaataacttgatggtcagtaaaatctggacacctgacacttttttcagaaat
ggcaagaagtcaattgctcacaacatgacaacccctaataaactcttcagaataatgcaa
aacggaaccattctatacactatgaggcttaccatcaatgctgactgtcccatgagactg
gttaactttccaatggatgggcatgcttgtccactcaagtttggaagttatgcttaccct
aaaagtgaaatcatatatacatggaaaaaggggccattgtactctgtagaagtcccagaa
gaatcatctagcctcctccagtatgatctgattggacaaacagcatctagtgagaccatt
aaatctaatacaggtgaatatgtaataatgacagtttatttccacttacaaaggaagatg
ggctacttcatgatacagatatacactccctgtattatgacagtcattctgtctcaggtg
tctttctggattaacaaggagtctgttccagcaagaactgtcttcggaatcaccactgtt
ctaaccatgacaactttaagcatcagtgctcggcattccttgcctaaagtttcatatgca
acagccatggattggttcatagctgtttgttttgcgttcgtgttctctgctctaatcgag
tttgcagctgtcaactacttcaccaatcttcagacgcagaaggccaaaaggaaagcacag
atttcagcctcctcccctgtgacaatatcaaaagcaactgaacctttggaagcagagatt
gttgtgcgttctgattcaaagtaccacctaaagaaaagaatcacctctctgactttacca
atagttccatcttctgaggccagcaaagttctcacaagagcacccatcctaccgccaaca
cctgtcacacctccaccactctcaccaacttttggcgacactagtaaaatagaccagtac
tctcgaattctctttccagttgcttttgcaggattcaatcttgtatactggatagtttat
ctttccaaagatacaatggaagctagtaatagcattgaatag
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