Ochotona princeps (American pika): 101520530
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Entry
101520530 CDS
T07609
Symbol
PIWIL1
Name
(RefSeq) piwi-like protein 1
KO
K02156
aubergine
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101520530 (PIWIL1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101520530 (PIWIL1)
piRNA pathway
101520530 (PIWIL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
GAGE
ArgoL1
ArgoN
ArgoL2
RNaseH_pPIWI_RE
Motif
Other DBs
NCBI-GeneID:
101520530
NCBI-ProteinID:
XP_004595479
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Position
21:complement(4998498..5019498)
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AA seq
642 aa
AA seq
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MARKTRATFSYNCHLGPRTLESSSVCCGHAVQIQISAGFQDLSLAERGGRRRDFHDLGVN
TRQNLDHVKESKTGSSGIIVRLSTNHFRLTSRPQWALYQYHIDYNPLMEARRLRSALLFQ
HEDLIGRCHAFDGTILFLPKRLQHKVTEVFSQTRNGERVRITVTLTNELPPTSPTCLQFY
NIIFRRLLKIMNLQQIGRNYYNPSDPIDIPNHRLVIWPGFTTSILQYENSIMLCTDVSHK
VLRSETVLDFMFNLYHQTEEHKFQEQVSKELIGLIVLTKYNNKTYRVDDIDWDQNPKSTF
KKADGSEVSFLEYYQKQYNQEITDLKQPVLVSQPKRMRGPGGTLPGPAMLIPELCYLTGL
TDKMRNDFNVMKDLAVHTRLTPEQRQREVGRLIDYIHKDDNVQRELRDWGLSFDSNLLSF
SGRILQAEKIHQGGKTVRWFSRCVFQDRGQELVDGLKVCLQAALRAWNSCNEYMPSRIIV
YRDGVGDGQLKTLVNYEVPQFLDCLKSVGRGYNPRLTVIVVKKRVNARFFAQSGGRLQNP
LPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDSSGLKPDHIQRLTYKLCHVY
YNWPGVIRVPAPCQYAHKLAFLVGQSIHREPNLSLSNRLYYL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaagacccgggcgacatttagctacaactgccatcttggcccaagaacactg
gagagctcgtcggtgtgctgtggccatgcagtgcaaatccagatatctgctggatttcag
gatttgtcattagcagagagagggggtcggcgcagagattttcacgatcttggtgtgaat
acgagacagaacctggaccacgtcaaagaatcaaaaacaggttcctccggcatcattgtc
aggctaagtaccaaccacttccggctgacgtcccgtcctcagtgggccctgtaccagtac
cacatcgactacaacccgctgatggaggccaggaggctgcgctcggccctgctcttccag
cacgaagacctcattggaaggtgtcatgcctttgacgggacaatactgtttttacccaag
agacttcagcacaaggtcacagaagtcttcagccaaacgcggaacggggagcgtgtgagg
atcactgtcacgctgaccaatgagctccccccgacgtcgcccacctgcctgcagttctat
aacatcatcttcaggaggcttttgaaaatcatgaatttgcaacaaattggacgcaactat
tacaacccaagtgacccaatagatattcccaatcacaggttggtgatctggcccggcttc
accacctccatcctgcagtacgagaacagcatcatgctgtgcaccgacgtcagccacaag
gtgctgcgcagcgagaccgtcctggacttcatgttcaacctgtaccaccagacggaggag
cacaagttccaggaacaagtttccaaggaactgattgggttgattgttctcaccaagtac
aacaacaagacgtaccgcgtggatgacatcgactgggaccagaaccccaagagcaccttt
aagaaggctgacggctccgaggtcagcttcctggagtactaccagaagcagtacaaccag
gagatcacggacctgaagcagccggtgctggtcagtcagcccaagaggatgcgtggcccc
gggggcacgctgccaggacccgccatgctcatcccggagctgtgctacctcacaggtctg
accgacaaaatgcggaatgacttcaacgtgatgaaggacctggcagtgcacacgaggctg
acccccgagcagaggcagcgggaagtggggcggctcatcgactacatccacaaagacgac
aatgtgcagcgggagctgcgggactggggcctgagctttgactccaacctgctgtccttc
tcgggacggatcctgcaggccgagaagatccaccaaggcgggaagacagtacgctggttc
tcgcgctgtgtgtttcaggacaggggacaggaacttgtggatgggctcaaagtctgcctg
caagctgccctgagggcctggaacagctgtaacgagtacatgcccagccggatcatcgtg
taccgggacggcgtgggggacggccagctcaagaccctggtgaactacgaggtgccacaa
ttcctggactgcctcaagtctgtcggcagaggctacaaccccagactgacagtcatcgtg
gtgaagaaacgtgtgaacgcccgtttttttgctcagtctggagggcgactccagaaccca
ctgcccggcactgtcattgatgtagaagtgaccagaccagagtggtatgacttcttcatc
gtgagccaagcagtgaggagcggcagcgtctcgcccacacactacaatgtcatctatgac
agcagtggcctgaagccggaccacatccagcggctgacctataagctatgccatgtctac
tacaactggccgggtgtcatccgtgtgcccgcaccctgccagtatgcccacaagctggcc
ttcctggtgggccagagcatccaccgggagcccaacctgtcgctgtctaaccgcctgtac
tacctctag
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