Ochotona princeps (American pika): 101520650
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Entry
101520650 CDS
T07609
Symbol
IRX3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101520650 (IRX3)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
101520650 (IRX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
101520650
NCBI-ProteinID:
XP_012782039
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Position
5:complement(26205221..26212599)
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AA seq
485 aa
AA seq
DB search
MLGAAKQELPRRRGAVGRVRERQSEWDELSAQRPASRPSGGRPVCSYEDAWAGPRDQPHP
SWPLFAVATRAVEGAQYELKDSPGVQHPAAAAAFPHPHPAFYPYGQYQFGDPSRPKNATR
ESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
SRTDEEGNAYGSEREEEDEEEDEEDSKRELELEEEELGGEEEDTGGEGLAEDDEDEEIDL
ENLDGASAGPELALAGAARRDGDLGLGPISDSKNSDSEDGSEGLEDRPLAVLSLAPAPPL
VATAPPSPPLPHSGLDSCAPAPAPASALQKPKIWSLAETATSPDNPRRSPPGAGGSPPGA
AVAPPALQLSPAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPPGPRPHPLSLLGSGPPHLL
GLPGAAGHPAAAAAFARPTEPEGGTDRSSALEVEKKLLKTAFQPVPRRPQNHLDAALVLS
ALSSS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgctgccaagcaagagctccctcggagacgcggtgccgtgggccgagttcgg
gagaggcagagcgagtgggatgagctcagcgcgcagcggccggcctcacgcccctccggg
ggtcgcccggtctgctcctatgaggacgcctgggccgggccccgggaccagccccaccct
tcatggcccctgtttgccgttgccactcgggctgtcgagggcgcgcagtacgagctgaag
gacagtcccggagtgcaacacccggccgcagccgccgcgtttccgcacccgcaccccgca
ttctacccgtacggccagtatcagttcggggacccgtcccgtcccaagaacgccacccgg
gagagcaccagcacgctcaaggcctggctcaacgagcaccgcaagaacccctaccccacc
aagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtgtccacc
tggttcgccaacgcgcgccggcgcctcaagaaggagaacaagatgacgtgggcgccccgc
agtcgcacggacgaggagggcaacgcgtacgggagcgagcgcgaagaggaggacgaggag
gaggacgaggaagacagcaaacgcgagctggagctggaggaggaggagctcgggggggag
gaggaggacacggggggcgagggcctggcggaggacgacgaagacgaggagatcgacttg
gagaacttggacggcgcgtcggccgggcctgagttggccctggctggggctgcgcgcagg
gacggcgatctcggcctggggcccatttcggattccaaaaacagcgactcggaagacggc
tccgagggtctggaggaccggcccctagcggttctgagtctggccccggcgccgccgctg
gtggccacggctccgccgtccccacccttgccccactccggcctggactcctgcgctccg
gctccggcgcctgcctccgccctgcagaagcccaagatctggtccctggccgagaccgcc
acaagtccggacaacccgcgccgctcgcctcccggagctggaggttctccccctggcgca
gccgtcgcacccccggcccttcagctctccccggcggccgctgcggcggcagcacacaga
ctggtctcggcgccgctgggcaaattccctgcttggaccaacagaccgttcccgggcccg
ccgcctggtccacgcccgcacccgctctccttgctcggttcgggtcctccgcacctgctg
ggacttcctggagccgcgggccacccggccgccgccgcagctttcgctcgacccacggaa
cccgaaggcggaacagatcgcagtagtgccttggaagtggagaagaagttacttaagaca
gctttccagcccgtgcccaggcggcctcagaaccacttggacgctgctctggttttatcg
gctctctcctcctcctag
DBGET
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