Ochotona princeps (American pika): 101520740
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Entry
101520740 CDS
T07609
Symbol
HOXC6
Name
(RefSeq) homeobox protein Hox-C6 isoform X1
KO
K09306
homeobox protein HoxA/B/C6
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101520740 (HOXC6)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
101520740 (HOXC6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101520740
NCBI-ProteinID:
XP_012781788
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Position
4:complement(53308956..53323524)
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AA seq
235 aa
AA seq
DB search
MNSYFTNPSLSCHLAGGQDVLPNVALNSSAYDPVRHFSTYGAAVAQNRIYSTPFYSPQEN
VVFSSSRGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASI
QIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL
TERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREDTEEEKQKE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctacttcactaacccttccttatcctgccacctcgccgggggccaggacgtg
ctccccaacgtcgccctcaattcctctgcctatgatccagtgagacatttctcgacctat
ggagcggcggttgcccagaaccggatctactcgactcccttttattcgccacaggagaat
gtcgtgttcagttccagccgggggccgtatgactatggatctaattccttttaccaggag
aaagacatgctctcaaactgcagacaaaacaccttaggacacaacacacagacctcaatc
gctcaggattttagttctgagcaaggcaggactgcaccccaggaccagaaagccagtatc
cagatttacccctggatgcagcgaatgaattcgcacagtggggttggctacggagcggac
cggaggcgcggccgccagatctactcgcggtaccagaccctggaactggagaaggaattc
cacttcaaccgctacctaacgcggcgccggcgcatcgagatcgccaacgcgctctgcctg
accgagcggcagatcaagatctggttccagaaccgccgcatgaagtggaaaaaagaatcc
aacctcacgtccacgctctcggggggcggcggaggggcggccgctgacagcctgggcggc
aaagaagagaagcgagaagacacagaagaggaaaagcagaaagagtga
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