Ochotona princeps (American pika): 101520841
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Entry
101520841 CDS
T07609
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101520841 (LRRTM1)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_EndoS
LRR_NXF1-5
HemY_N
UL97
LRR_12
Motif
Other DBs
NCBI-GeneID:
101520841
NCBI-ProteinID:
XP_004590769
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Position
2:complement(65628897..65631869)
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AA seq
523 aa
AA seq
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MDFLLLGLCLYWLLRRPSGVVLCLLGACFQMLPAAPSGCPQLCRCEGRLLYCEALNLTEA
PHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTL
SSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCL
RRNKVAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRIL
NSWKSLTSITLAGNLWDCGRNVCALASWLSNFQGRYDGNLQCASPEYAQGEDVLDAVYAF
HLCEDGAEPTSGHLLSAVTNHSDLGPPATPATTLANGEEGQRDGTLEPATVALPGAGEHA
ENAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQ
MAAMSAQEYYVDYKPNHIEGALVIINEYGSCTCHQQPARECEV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgctgctcggtctctgtctatactggctgctgaggaggccctcgggggtg
gtcttgtgtctgctgggggcctgctttcagatgctgcccgccgcccccagcgggtgtccg
cagctgtgccggtgcgaggggcggctgctgtactgcgaggcgctcaacctcaccgaggcg
ccccacaacctgtccggcctgctgggcttgtccctgcgctacaacagcctctcggagctg
cgcgccggccagttcacggggttaatgcagctcacgtggctctatctggatcacaatcac
atctgctcggtgcagggggacgcctttcagaaactgcgccgagttaaggaactcacgctg
agttccaaccagatcacccaactggccaacaccaccttccggcccatgcccaacctgcgc
agcgtggacctctcctacaacaagctgcaggcgctggcgcccgacctcttccatgggctg
cggaagctcacaacactgcacatgcgggccaacgccatccagttcgtgcccgtgcgtatt
ttccaggactgccgcagccttaagtttctcgacatcggatacaatcagctcaagagcctg
gcgcgcaactctttcgcaggcttgttcaagctcactgagctgcacctggagcacaacgac
ttagtcaaggtgaacttcgcccacttcccgcgcctcatctccctgcactctctctgcctg
aggaggaacaaggtggccattgtggtcagctcgctggactgggtctggaacctggagaaa
atggacctgtcgggtaacgagattgagtacatggagccccatgtctttgaaaccgtgccg
cacctgcagtccctgcagttggactccaaccgtctcacctacgtcgaaccccgtatcctc
aactcatggaagtcccttactagcatcactctggctgggaacctgtgggactgcgggcgc
aacgtgtgcgccctggcctcgtggctcagcaacttccaggggcgctatgacggcaacttg
cagtgtgccagcccggagtacgcacagggcgaggacgtgctggatgccgtctatgcattt
cacttgtgcgaggatggggccgagcccaccagcggccacctgctctcggctgtcaccaac
cacagtgacctgggacctcctgccaccccggccaccacgctggccaacggcgaggagggg
cagcgcgatggcacgctggagccggccactgtggctctcccgggagccggggagcatgcc
gagaatgccgtccagatccacaaggtggtcaccggcaccatggccctcatcttctccttc
cttatcgtggtcctggtactctacgtgtcctggaagtgtttcccagccagcctcaggcag
ctcagacagtgctttgtcacgcagcgcaggaagcaaaagcagaaacagaccatgcatcag
atggctgccatgtctgcccaggaatactatgttgattacaaacccaaccacattgaagga
gcgctggtgatcatcaacgagtacggctcctgcacctgccaccagcagcccgcgagggaa
tgcgaggtgtga
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