Ochotona princeps (American pika): 101520928
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Entry
101520928 CDS
T07609
Symbol
SCARF2
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101520928 (SCARF2)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
101520928 (SCARF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
EGF_laminin
EGF_TEN
Kelch_1
BTB_KLHL33
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_6
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_4
NANM
Kelch_5
DUF4730
EGF_Teneurin
EGF_PEAR1L
EGF_2
Motif
Other DBs
NCBI-GeneID:
101520928
NCBI-ProteinID:
XP_004592204
LinkDB
All DBs
Position
21:20962131..21008965
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AA seq
904 aa
AA seq
DB search
MALSSAKSRRAVAILAPGAAGASPLPPSPCVRGCSSRGQLGLGRGTRDALLANGPAGRGG
VVGARGAVAMAEEQEFTQLCKLPSQQPSQSHCGTNTYRSTQHSQALLRGLLALRDSGILF
DVVLVVEGRHIAAHRILLAASCDYFRGMFAGGLKEMEQEEVLIHGVSYNAMCQILHFIYT
SELELNLSNVQETLVAACQLQHAGVWEGMGRLKHPPSARSSQVPTCCAGWKQQGDECAIA
VCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKELCSCHPHGQCEDVT
GQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTG
ACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCERYCQCFRGRCHPVDGTC
ACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVVEGRCLTCEPGWNGTKCDQPC
ATGFYGEGCGHRCPPCRDGHACNHVTGKCPRCNAGWIGDRCETKCSNGTYGEDCAFVCSD
CSSGHCDFQSGRCLCSPGLHGPHCNLTCPPGFHGVDCAQACSCREDSCDPVTGACRLETN
QRKGVMGAGALLALLLGLLLSLLGCCCACRGKDPARRDLPLGRKTPQRLCGRFSRISMKL
PRIPLRRQKLPKVVVAHHDLDNTLNCSFLEPPSGLEQPSPSWSSRASFSSFDTTDEGPVY
CVPHEEAAAENLDTEGPPDPAPSPAPLASPASVEETAPPPASSDSEPSASSVEGPGAALV
VPREAVYAHAGATLEGKMYITCGRRGEDYLRETHCYDPDSNTWQALADGPVRRAWHGMAT
LLDKLYVIGGSNNDAGYRRDVHQGATAGSPAPDTPRKKTPIQKPPRKKSREAAGEPGRAG
APTL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtccagtgccaaatcgcgcagggctgtggcgatcttggcgccgggagcagcg
ggggcgtcgcctctgccaccatcaccttgtgtccggggctgctcctcccgtggacagctc
ggcctgggcagggggacccgagatgccctactggctaacgggccggccggccgcggcggt
gtggtgggtgcccgtggagccgtggctatggcagaggagcaggagttcacccagctgtgc
aagctgccctctcagcagccctcgcagtctcactgcggcaccaacacttaccgcagcacg
cagcactcccaggccctgctccgggggctgctggcgcttcgggacagcggcatcctcttt
gacgtcgtcctcgtggtggaggggaggcacatcgcagcccaccgcatcctgctggcagca
tcctgcgactacttccgagggatgttcgccgggggcctgaaggagatggagcaggaggag
gtgctgatccacggcgtgtcctacaatgccatgtgccagatcctgcatttcatatacacc
tctgagctggagctcaacctcagcaacgtgcaggagacgctggtggctgcctgccagctg
cagcatgccggagtctgggaagggatgggcaggctcaagcatcctccctctgcccgcagc
tcccaggtacccacgtgctgtgccggctggaagcagcagggagatgagtgtgcaatcgcg
gtgtgcgaaggcaattccacgtgctctgagaacgaggtgtgcgtgcggcccggcgagtgt
cgttgccgccacggctacttcggcgccaactgcgacactaagtgcccgcgccagttctgg
ggtcccgactgcaaggagctgtgcagttgtcacccacacgggcagtgcgaggacgtgacg
gggcagtgtacgtgtcacgcgcggcgctggggagcgcgctgcgagcacgcgtgccagtgc
caacacggcacgtgccacccgcggagcggggcgtgccgctgcgagccgggctggtggggc
gcgcagtgcgccagcgcgtgctactgcagcgccacatcgcgctgcgacccgcagacgggc
gcctgcctgtgccacgcgggctggtggggccgcagctgcaacaaccaatgcgcgtgcaac
tcgtcgccctgcgagcagcagagcggccgctgccagtgccgtgagcgcacgttcggtgcg
cgctgcgaacgctactgccagtgcttccgcgggcgctgccacccggtggacggcacgtgc
gcctgcgagcccggctaccgcggcaagtactgccgggagccgtgccccgccggcttctac
ggcctgggctgtcgccgtcggtgcggccagtgcaagggccagcagccgtgcacggtggtc
gaggggcgctgcctgacgtgcgaacccggctggaacggaaccaaatgcgaccagccgtgc
gccaccggcttctatggcgaaggctgtggccaccgctgcccgccgtgccgcgatgggcac
gcgtgcaaccacgtgaccggcaagtgtccgcgctgcaacgcgggctggatcggcgaccgg
tgcgagaccaagtgcagcaatggcacttacggcgaggactgcgccttcgtgtgctctgac
tgcagcagcggccactgcgacttccaatccgggcgctgcctgtgcagcccaggccttcac
gggccgcactgtaacctgacttgcccgcctgggttccacggggtggactgcgcccaggcc
tgcagctgcagggaggactcgtgcgacccggtcaccggtgcctgccgcctggagaccaac
cagcgcaagggcgtgatgggcgcgggcgcgctgctcgccctgctcctcggcctgctgctc
tcgctgctcggctgctgctgcgcctgccgcggcaaggaccctgcgcgcagggacctcccg
ctggggaggaagaccccgcagaggctgtgcgggcgcttcagccgcatcagtatgaagcta
ccccggatcccgctgcgcaggcagaagctgcccaaggtcgtagtggcccaccacgacctg
gacaacacgctcaactgcagcttcttggagccgccctcggggctggagcagccctccccg
tcatggtcctcccgggcctccttctcttcctttgacaccacagacgagggccccgtgtac
tgcgtcccccacgaggaggcggcagccgaaaacctggacacggaggggccccctgaccct
gcaccatcccccgcgcccttggcctcgccggcctcggtggaagagaccgctccgccgccg
gcgtcctccgacagcgagccctcggcctcgagcgtggagggccccggggcggcgctagta
gtgcccagggaagcagtgtatgcccacgcaggtgccacgctcgaggggaagatgtacatc
acttgtggccgcagaggggaggactacctcagggagacacactgctacgacccggatagc
aacacctggcaagccctggctgacggacctgtgcggcgggcctggcacggcatggccacg
ctcctggataagttgtatgtgattgggggcagcaacaacgacgctggctataggcgagat
gtgcatcagggcgccacagctggctcgccggcacccgacacccctcggaagaagaccccc
atccagaagccgccgcgcaagaagagccgggaagcggcgggcgagccgggcagggcgggc
gcccccacgctgtag
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