Ochotona princeps (American pika): 101521035
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Entry
101521035 CDS
T07609
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101521035 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101521035 (RPP40)
03016 Transfer RNA biogenesis [BR:
opi03016
]
101521035 (RPP40)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101521035 (RPP40)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
101521035 (RPP40)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
101521035 (RPP40)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
101521035 (RPP40)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
101521035 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
101521035
NCBI-ProteinID:
XP_004598676
LinkDB
All DBs
Position
12:2674946..2683772
Genome browser
AA seq
363 aa
AA seq
DB search
MATLRRLRDTPRHLLVCEKSNFGHEKSRHRHVVETHYYNYRVSFLIPECALLPQELKSLV
TEFGPYYLVKNLPVHELISPEFINTFVKKGSCYALTYNTNIDEDNTVALLPSGKLILSLD
KDTYEETGLQGHPSKYSGRKIMKFIVSIDLMDLSLNLISKKYERISWSFKEKKPLKFDFL
FAWHNTGAQELAVVSYFGSYQIREHQPQVAVSSLGELPCPVLQSRELGGQPDASCGALEL
FDWLGAVCSDASLTNEPSDFVSTCCCPQPSTVLARACLCTVTGFLLPEKVGLLLERLRHY
FDEPKLAPWLTLSVQGFADSPVSWREKEHGFRRGGEHLYSFVVFSNQDYWLQMAVGAEDD
CPP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttgcgcagactgcgagacacgccacggcacttactggtctgcgagaaatcc
aatttcggccacgaaaagtcgcgccaccggcacgtggtggagacgcactattacaactac
agggtctcgttcctcattccggaatgtgccctcctgccccaagaactgaaaagtctggtg
accgagtttggaccctattaccttgtgaagaacttacctgtgcacgaactgatcagcccc
gagttcatcaacacctttgtgaagaaaggctcgtgctatgcgctcacgtacaacacaaac
atcgatgaagacaacaccgttgccttgctcccaagtgggaaattgattttatccctggat
aaagacacttatgaagaaactggactccaaggtcatccctctaagtattccggcagaaaa
atcatgaaatttattgtttccattgatttgatggatttatccttgaacctgatttctaag
aagtatgaaagaatatcttggtccttcaaggaaaagaaacccctgaaatttgattttctt
ttcgcctggcataatacaggtgcccaagaactggcggtggtgtcgtactttggcagttac
cagatccgggagcatcagccgcaggtggccgtgagcagcctgggagagctgccgtgcccc
gtgctgcagagcagggagctggggggccagccggacgcgtcctgcggggccctggagctc
ttcgactggcttggtgctgtctgcagtgacgccagcctaactaacgagcccagcgatttc
gtgtccacctgctgctgtcctcagcccagcacggtgctggcccgagcctgtctctgcacc
gtcactggcttcctgcttccggagaaggtcgggctcctgctggaacggctgcggcactac
ttcgatgagccgaagctggccccgtggctgacgctgtcggttcaaggcttcgcggacagc
cccgtgtcgtggcgagagaaggaacacggcttccgcagaggcggcgagcatctgtacagc
ttcgtggttttcagcaatcaggactactggcttcagatggccgtgggcgccgaggacgac
tgtccgccctga
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integrated database retrieval system
