Ochotona princeps (American pika): 101521057
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Entry
101521057 CDS
T07609
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101521057 (RFWD3)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101521057 (RFWD3)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101521057 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
Beta-prop_WDR5
zf-RING_UBOX
WD40_CDC20-Fz
Beta-prop_THOC3
EIF3I
WDR55
zf-C3HC4_2
Beta-prop_WDR3_1st
WD40
zf-RING_5
zf-RING_11
zf-rbx1
Beta-prop_EML_2
Beta-prop_WDR75_1st
Rtf2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
zf-C3HC4_4
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
zf-RING_Vps41
Beta-prop_ACSF4
Nairovirus_Gn
zf-UDP
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
zf-ANAPC11
zf-Nse
ExsD_M
Motif
Other DBs
NCBI-GeneID:
101521057
NCBI-ProteinID:
XP_004584249
LinkDB
All DBs
Position
5:complement(41798500..41831625)
Genome browser
AA seq
713 aa
AA seq
DB search
MAHEAMEYNIQVQVEHPASEQLVPDVFVTRPGQFLILPPHVEVVSSQEGSLVIQPNRVEV
VNRQEQAPLLQPTSVEGADSQGMPPLLQPPPADVGHRHFIVPLLPPAPQDSVSQPEEVGL
AREVSVETMDPGAPEQHGQILAANHNFQEASLGSVSNFISGLQRLHGMLEFLRPPNAEHS
VGPVRVRRRGAASRRARIGGSQRTDNASGSSPVAPSASVDDEEGDTCTICLEQWTNAGEH
RLTALRCGHLFGYKCISKWLKGQARKCPQCNKKAKHSDIVVLYARNLRALDTSEQEQLKS
SLLKEQMLRKHAELESAQCRLQLEVLTNECTKLQSRIQDLQTLILQHREQTLQQPGGSQA
QSLGCQPSSQGQHKYHFEKTFPVSQTGNCRIMAYCDSLSCLVVSQPSPQASFLPGFGVKM
LSTANMKSTQYIPMHSKQIRGLAFNTRSKGLLLSASLDNTIKLTSLETNTVVQTYNTGRP
VWSCCWCLDENHFFYAGLVSGSILVYDLRNTRCHVQELVSQRARCPMVSLSYIPKAASAA
FPYGGVLAGTLENACFWELKAGLLHWPYSLPLEQGGCIDFQTESSTRHCLVTFRPDKNHN
TMRSVLMEMSHRINDAGDRVCLCNPVQTFHGGPTCKLLTKNAIFQSPKHDGSLLVCTGDE
ASNSALLWDAGSGSKLQDLQTDQPVLDICPFEVNHSSYLATLTEKTVHLYRWQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgaagcaatggaatataacattcaagtgcaggtggaacatcctgcctcagaa
cagcttgttcctgatgtgttcgtaaccaggccaggacagtttctcatcctgccgcctcat
gttgaagttgtcagcagccaagagggatcacttgtgatccagcctaatcgtgttgaagtt
gtgaacagacaagagcaagcacccctgcttcagcctacttctgttgaaggggctgacagc
caagggatgccccccttgctccagccacctcctgcggatgtaggccacagacacttcata
gtgcccctgcttcctcctgctccccaggactctgtcagccagccggaggaagtaggcctt
gccagggaggtttctgtggagaccatggatcctggagcacctgagcagcatgggcagatc
ctggcagctaaccacaatttccaggaggcttcattgggttccgtgagcaacttcatcagt
ggactacagagacttcacggcatgctggaattcctgagacctcccaatgcagagcacagt
gtggggccggtgcgagtgaggagaaggggggctgcttcacgcagagccagaattggaggg
tcgcaaaggaccgataatgccagtgggtccagccctgtcgcaccttctgcttctgttgat
gatgaagaaggggacacatgcacgatttgtttggaacagtggactaatgctggggaacac
cggctgacagcactacgttgtgggcatctctttgggtataagtgcatttctaagtggctc
aaaggacaagcacgaaaatgtccccagtgcaataagaaagccaagcacagtgacatcgtt
gttctttatgcccgaaatctgagagctttggacacgagtgaacaggagcagctcaagagt
tccttactgaaggagcaaatgcttaggaagcatgctgagttagaatcagcccagtgccgg
ctgcaactcgaggtcctcactaatgaatgcactaaactgcagagtcgtattcaggacttg
caaaccctgattctgcaacatagggagcagactttacagcagcccggaggctctcaggca
cagtccctgggctgccagccttccagccaggggcagcacaagtaccacttcgagaagacc
ttcccagtgtctcagacaggaaactgccggatcatggcatactgtgattctcttagctgc
ctggtggtgtcgcagccttctcctcaggcctcgttccttccaggctttggtgttaagatg
ttgagtactgccaacatgaaaagcactcagtacattccaatgcatagcaaacagatccgt
ggtttggctttcaacacccggtctaaaggcttgctgctttctgcttccctggacaataca
attaaactgaccagcctggagacaaatactgtggtgcagacttacaatactggacggcct
gtttggagctgttgctggtgtctcgatgaaaaccattttttctatgctggactggtcagc
ggttcaatccttgtatatgacctgcgaaatacaagatgtcacgtccaggaattggtctct
cagagagccagatgcccaatggtatccctgtcatacatacccaaagctgcctcagctgcc
tttccatatggtggggtactggctggaaccttggagaatgcttgcttctgggagctgaaa
gcaggccttctgcattggccttattcactgcccttggagcaagggggctgcatagacttt
cagaccgagagcagcacccggcactgtcttgtgaccttcaggccagataaaaaccacaac
actatgagaagtgtgctgatggagatgtcgcacaggataaacgatgctggagaccgtgtc
tgcctctgcaatcctgtacagacgttccatggtggccccacttgcaaactacttaccaaa
aatgccatcttccaaagtccaaagcatgatggcagccttttggtgtgcactggggatgaa
gcatcaaattctgccttgctgtgggatgctggcagtggctccaagttgcaggacctgcag
actgatcagcctgtgttggatatctgcccatttgaggtgaaccatagtagctacttggcc
accttaacagagaagaccgtccacctgtataggtggcagtga
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integrated database retrieval system
