Ochotona princeps (American pika): 101521142
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Entry
101521142 CDS
T07609
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101521142 (IRX6)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
101521142 (IRX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Linocin_M18
Motif
Other DBs
NCBI-GeneID:
101521142
NCBI-ProteinID:
XP_004584178
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All DBs
Position
5:27110294..27114074
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AA seq
495 aa
AA seq
DB search
MSFPHFGHPYSGASQFLVSASSSATCCESTPHSMSDVTSGSTPPAPTLCCAPYDNRLLGT
ARPELGAALGIYGTPYAAAAAAQSYPGYLPYGPEPPALYGALNPQYEFKEAAGSFTPGLA
QPGAYYPYEQTLGQYQYDRYGTVELSSTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEEKKAEGGAQESLDCFKRDT
KEVTVRQETQELRLSDLEDLEEEEEEADEEEAVATAANRLAGFPTDIQLLPAPDDRLERR
QCGLVAPRFSFSEPPGAGEVHFLKTEPGGPTLTTHYPRGEKPRIWSLAHTAAAGALEAAP
APWPAPRSPECHRIPRQPPRSSRQPAIPTDSVGEQSARIAKAFGNPAFALQGLPLNCAPC
PRRREPAVQCPYPASAEGSGPPTALGTPVTASAPASCPAIQTTSLLPHRRAHPSSELSEP
HSFTGKRRDHFPELE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcacttcggacacccgtacagtggcgcttcccagtttctggtttctgca
agttccagtgccacttgctgtgaatccactccgcactccatgtctgatgtgacctcaggc
tccacaccgccagccccaactctctgctgtgcaccctatgacaatcggctgctgggcact
gcacggccggaactgggtgctgccttgggcatctacggaaccccttatgctgctgctgca
gctgcacagtcctaccctggctacctcccctatggtccagagccacctgcactgtatggg
gcgctgaatccacagtatgaatttaaggaggctgcggggagcttcacacctggcctggca
caaccaggagcctattatccttatgagcagacactagggcagtaccagtatgaccgctat
ggcaccgtcgaattgagtagtactggacgcaggaagaacgccacccgggagaccacgagc
acgctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaagatgacgtgggcgcccaagaacaaaggaggg
gaagagaagaaggcagaaggcggagcccaggagtctctggactgcttcaaaagagacacc
aaagaagttactgtccgccaggagacccaagagctgaggctgagtgacctagaagacctg
gaggaagaggaggaagaggccgatgaagaagaggcggtggccacagcagccaacaggctg
gcggggtttcctacagacatacagttgctacctgcgccagacgaccgcttggagcgcagg
caatgcggcttagtggcgccccgcttttccttcagtgaaccccccggagcgggagaagtt
cacttcctcaagaccgagccagggggccccacgctgaccacgcattacccccgaggcgag
aaaccgcgcatctggtctctggctcacactgcggctgctggtgctctggaagccgcacct
gcaccctggcccgcaccacgaagccctgagtgtcacaggatccccagacagcctcctcgc
tcctccaggcaacccgcgattcccacagactccgtgggcgagcaatctgcccgcatagcc
aaagcctttggaaatccagcctttgccctgcaggggctgccgctgaactgtgcgccctgc
ccgcggcggagggagcctgcagtgcagtgcccgtacccagccagcgcggaaggtagtggg
cccccaacggcgctggggactcctgtcacagcgagtgcacccgcttcctgccctgccatt
caaaccacctctcttcttccccaccgcagggcccacccaagttcagagctgtccgaaccg
cactccttcacaggaaagcgcagagatcatttccctgaattagagtaa
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