Ochotona princeps (American pika): 101521193
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Entry
101521193 CDS
T07609
Symbol
RBM26
Name
(RefSeq) RNA-binding protein 26 isoform X4
KO
K13192
RNA-binding protein 26
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
opi01009
]
101521193 (RBM26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101521193 (RBM26)
03041 Spliceosome [BR:
opi03041
]
101521193 (RBM26)
Protein phosphatases and associated proteins [BR:
opi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101521193 (RBM26)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101521193 (RBM26)
Spliceosome [BR:
opi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101521193 (RBM26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
COG5_N
Motif
Other DBs
NCBI-GeneID:
101521193
NCBI-ProteinID:
XP_004577469
LinkDB
All DBs
Position
8:complement(50526064..50633066)
Genome browser
AA seq
1011 aa
AA seq
DB search
MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSAGSLKVEFFQHQEKDIKKEEITKEEEREKKF
SRRLNHSPPQSSSRYRENRSRDERKKEDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRQPMPKKRCRDYDEK
GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQTPPAPP
SLFTAVFVLPDTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKP
PNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLE
LRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLN
NRFIKVYWHREGSTQQLQNTSPKPLVQQPILPVVKQSVKERLGPVPSSTVEPAEAQSASS
ELPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAV
DNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLE
VLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKY
TELQLEAAKRGILSSGRGRGIHSRGRGTAHGRGRGRGRGRGRGVPGHAVVDHRPRALEIS
AFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRVDAEVAAVHGARFKGQDLKLA
WNKPIANISAVETEEIEADEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggtttctaaaatgatcattgaaaacttcgaggccctcaagtcctggctcagcaagacc
ctcgagcccatctgtgatgcagatccatcagccctagcaaaatatgttctggctttggta
aagaaagataaaagtgaaaaagagttaaaggcattatgtattgatcagctggatgtattt
cttcagaaagagacacagatatttgtggagaaactttttgatgctgtgaatacaaagagt
tatctacctcctcctgagcagccatcagcaggaagcctaaaggtagaattttttcagcac
caagaaaaagatattaaaaaggaagagatcacaaaagaggaagaacgagagaaaaagttc
tctagaaggttaaatcatagtcctcctcagtcaagctctcgttacagagaaaatagaagt
cgtgatgagaggaaaaaagaggatcgttctcgcaaaagagattatgaccgaaaccctcct
cgaagagattcctacagagaccggtacaacagaagaagggggcgcagtcgcagctacagc
cgaagtcggagtcggagctggagcaaggagagactgcgtgacagggacagagataggagc
agaacacgaagcaggagcagaacacgaagcagggaaagagatctggtaaaacctaaatat
gacctggatagaacggatcccttagaaaacaattatactccagtctcttcggtacctagt
atttcatctggtcactatcctgtacccactttgagcagcactattacagttattgctcct
actcatcatggtaacaacactactgaaagttggtctgaatttcatgaagatcaggtggac
cataactcttacgtaagacaaccgatgccaaagaaacgatgtagagactatgatgaaaag
ggtttttgtatgagaggagacatgtgcccttttgatcatggaagtgacccagtagttgta
gaagatgtgaatcttcctggtatgctgccttttccagcacaacctcctgttgttgaagga
ccacctcctcctgggctgcccccaccgccaccaattcttacacccccacctgtgaatctc
agacctccagtgccacctcctggtccgttaccgcccagccttccacctgtcacaggacca
ccacctcctcttcctcctttgcagccatctggcatggatgctcccccaaattctgcgacc
agttctgttcctactgtagtaacaactggcattcatcatcaaactcctccagctccaccc
tctctttttactgcagtttttgtattaccagatacatatgacacagatggctacaatcct
gaagccccaagtataacgaacacttccagacctatgtacagacacagagtgcatgcgcag
aggcctaacttgataggactgacatcaggggatatggatttgccacccagagaaaagcca
cctaataaaagcagtatgaggatagtggtggattcagagtcaaggaaaagaaccattggt
tctggggagcctggagttcctacgaagaagacttggtttgataaaccaaactttaacaga
acaaacagcccaggctttcagaagaaggttcagtttggaaatgagaacaccaaactagaa
cttagaaaagttcctccagagttaaataatatcagcaaacttaatgaacattttagtcga
tttggaaccttggttaacctacaggtagcctataatggtgatcctgaaggtgctcttatc
caatttgcaacttatgaagaagcaaagaaagcaatatcaagtacagaagcagtgttaaat
aatcgctttattaaggtttattggcacagagaaggaagcactcaacagttacaaaatact
tccccaaagcctttagtccagcagcccattttgcctgttgtgaaacagtcagtcaaagag
cggttgggtccagtaccttcaagtactgttgagccagcagaagcccagagtgccagttca
gaacttcctcagaatgtaactaagttatctgtgaaggacaggttgggttttgtatcaaag
ccatctgtttcagcaactgaaaaggtgttgtctacatctactggtctaactaaaacagtg
tataatccagctgcgttgaaggctgcacaaaaaaccttactagtttccacgtctgcagtt
gataataatgaagcacagaagaagaagcaggaggcactgaaacttcagcaggatgtaaga
aaaaggaaacaagaaattttggaaaagcacattgaaacacaaaagatgttaatttcaaaa
ctggagaaaaataaagcaatgaaatctgaagataaagcagaaatcatgaaaactcttgaa
gttttgacaaaaaatatcaccaagttgaaagatgaggtcaaagctgcgtctcctggtcgc
tgtcttccaaaaagtataaagaccaagactcagatgcaaaaagaattgcttgatacagag
ctggatttatataagaagatgcaagctggagaagaagtcactgaacttaggaggaagtat
acagaattacagctggaggctgcaaaacgagggattctttcctctggtcggggtagagga
attcattcaagaggtcgaggtacagctcatggccgtggcaggggtcgaggtcgagggcga
gggcgaggtgtacctggtcacgctgtggtggatcaccgtcccagggcattggagatttct
gcgtttacagagagtgatagagaagatcttcttcctcattttgcgcaatatggtgaaatt
gaagattgtcagattgatgactcttcacttcatgcagtaattacattcaagacaagagta
gacgctgaagtagctgcagttcatggagctcgttttaaagggcaggatctaaaattggca
tggaataaaccaatagctaacatttcagcagtggaaacagaagaaattgaagctgatgaa
gaggaatttcaggaagagtctttggtggatgattcattacttcaagatgatgatgaagaa
gaagaggacaatgaatctcgttcttggagaagatga
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