Ochotona princeps (American pika): 101521200
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Entry
101521200 CDS
T07609
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X4
KO
K18744
caprin-2
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101521200 (CAPRIN2)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101521200 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
101521200
NCBI-ProteinID:
XP_004599223
LinkDB
All DBs
Position
8A:5992674..6038061
Genome browser
AA seq
1042 aa
AA seq
DB search
MKAAKPQVNHSPHGEGPRAMSPLQAALSSAASPSQAYETYIDNGLICLKHKIRNIEKKKL
KLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRR
EQLMKLEAEKKKLRTILQVQYVLQNLAQEHVQKDFQGGLNGAVYLPSKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPK
NAKEKKVSLEEELLIQSEKKKQLLKTEPVTESDALLELAQPEIQPQEFLNRHYMTEVDYS
SKAEEQPWEADYARKPNLPKCWNVLAEPDGQEQQQEPFRSWESAAKPPEAAKPAVSLEPR
KPEAPKPRSTLQEDPKRQCVSKAKPAPSQGKQEVPKAKASCTAQEQRKQEPSKPWPGQPQ
KEQDPNKPSPPKSWTPPVHSEQGLTKSWTPPLGEDQESKQLESPKTWENGVRSQKHSSTP
QSQVSPKSWGAAAASLMPSDPLLPRKFNAEPKDVPSPVQQPIGSSSALPKDPVLRKEKLQ
DLMTQIQGTCNFMQESVLEFEKPSSAIPSSQPPSSAPESPGASVEQKLSSRSESLQEPSQ
AASPIACSANAGLVITDQVSLGTEAEFMTSETPQAAVTASKRPSSPGVPMSKGSEQSSQS
PPASSSSVTVNTAPFQAMQTVFDVNAPLPPRKEQEMKDPAYSPGYNQSFTTASTQTPPQC
QLPAIHVEQTVLSPETAANHHPDGTIQVSNGSLAFYPAQTNVFPRAAQPFVGSRGSVRGC
ARGGRLLTNSYRSPGGYKGFDTYRGLPSISNGNYSQLQFQGRDYPGSPYSQRENFQQCYK
RGGASGGPRANSRAGWSDSSQVSSPERDSETFNSADSGQGDSRSMTPVDVPVPSPAATIL
PVQVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTY
VFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDRVWLRLH
RGAIYGSTWKYSTFSGYLLYQD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgccaagccccaggtgaaccacagcccgcacggggaaggcccgcgggccatg
agccccctgcaggccgccctcagttccgcagcgtcgccttcccaggcttacgagacctat
attgacaatggactcatttgccttaaacacaagatccgaaacatcgagaaaaagaagctc
aaactggaagactacaaggatcgcctgaagaatggagagcacctgaacccagaccagttg
gaagcagtagagaaatacgaagaagtgctacataatttggaatttgccaaggagctccag
aaaaccttctctggactaagccaagatctgctgaaggcgcagaagaaggcccagagaagg
gagcagctgatgaaactggaggcggagaagaagaagctgaggaccatccttcaggtccag
tacgtgctgcagaacctggcccaggagcacgtgcaaaaggacttccaagggggcttgaac
ggggcagtgtatttgccttccaaagaactcgactacctcattaaattttcaaaactcacc
tgccccgagagaaatgaaagtctgagtgttgaagaccagatggagcagtcatccttgtac
ttctgggaccttctggaaggtagcgagaaagcagtagtaggaacgacatataaacatatg
aaagatctcctgtcaaaattgctgaactcaggctattttgaaagtatcccagttcccaaa
aatgctaaagaaaaaaaagtgtctttggaggaagaactgctgatacagtcggagaagaaa
aaacagttgttgaagactgaacctgtcacagagtcagatgctctgctggaacttgcacag
ccagagatacagccccaagagtttcttaacaggcactatatgacggaagtagattattca
agcaaagcagaagagcagccatgggaagccgattatgctagaaaaccaaatctccccaaa
tgttggaatgtcctggctgaaccagacggccaggagcagcagcaggagcccttcagatcc
tgggagtctgcggccaagcccccggaggcagccaagccggccgtgtccttggagccaagg
aagccggaggccccgaagcctaggtccactctgcaggaagatcccaagaggcagtgcgtt
tccaaggccaagccggcccctagccaggggaagcaggaagtacccaaggccaaggccagc
tgtactgcacaggagcagaggaagcaggagccctcgaagccctggccgggtcagccgcag
aaagagcaggatcccaataagccatcaccgccaaagtcctggacgcctccagtgcacagc
gaacagggcctgaccaagtcctggacccctcccctgggcgaagaccaggaatccaaacag
ctcgagtccccaaagacctgggagaacggggtgaggagtcagaagcattcctcgacacca
cagtcacaggtttctccgaagtcctggggggcggctgctgcaagcctcatgcccagtgac
ccactgctgcccaggaagttcaatgcggaacccaaagatgtgcctagccctgtgcagcag
cccataggctcttcctctgccctcccaaaggatccagtcctgaggaaagagaaactgcag
gatctgatgacccagattcaaggaacctgtaattttatgcaagaatcagtcctggagttt
gagaaaccttcaagtgcaattccatcgtcacagccgccttcatctgctccggagagccca
ggagcctccgtggagcagaagctgtccagccggagtgagtctcttcaggagccctcgcag
gctgcttctcccatcgcctgcagcgccaatgctggcttggtcattaccgaccaggtgtcc
ttgggaacggaagcagagtttatgacttcagagactcctcaggcagccgtaaccgccagc
aagcggccgtcttcgcccggcgtgcccatgtccaagggctctgagcagagctcccagtcc
cctcctgcaagcagcagctcagtgaccgttaacactgcacccttccaagccatgcaaacc
gtgtttgatgtgaacgcacctctgcctccgcgcaaagaacaagagatgaaggaccccgct
tactcaccgggctacaatcagagtttcactacagcgagcacacagaccccaccccaatgc
cagctgccagctatacacgtggaacaaactgtcctctccccggagactgcagcaaatcat
catcccgatggaactattcaagtaagcaatggtagccttgccttttacccagcacagacc
aacgtgtttcccagagctgcccagcccttcgtcgggagccggggctcagtgagaggatgt
gctcgcgggggcaggttgctgaccaattcctaccgctcgccgggtggctacaaaggcttt
gatacttacagaggcctcccctcaatttccaatggaaactacagccagctgcagttccaa
gggcgcgactatcccggatccccgtattcccaaagggagaatttccagcagtgttataag
cgaggaggggcttctggtggtcctcgggcaaactcaagagcagggtggagtgattcttct
caggtgagcagcccggagagagacagcgagaccttcaatagtgccgactcgggccaagga
gactcgcgcagcatgacccctgtggacgtacccgtgcccagccccgccgccaccatcctg
cccgtacaggtctacccgctgccccagcagatgcgcgtggccttctctgcagccaggacc
tccaacctggcccctgggaccctggaccagcctatcgtgtttgatctcctcctcaacaac
ctgggggagacattcgacctgcagctcgggagatttaactgcccggtgaacggcacgtac
gtgttcattttccacatgctgaagctggccgtcaacgtgcccctgtacgtcaacctcatg
aagaacgaggaggtcctggtctctgcctacgccaacgacggcgctccggaccacgagacg
gccagcaaccatgccgtcctgcagctcttccagggcgatcgcgtctggctgcgcctgcac
aggggggccatctacggcagcacctggaagtattccacattctcaggctaccttctctat
caggattga
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