KEGG   Ochotona princeps (American pika): 101521241
Entry
101521241         CDS       T07609                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101521241 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:opi03019]
    101521241 (WDR33)
Messenger RNA biogenesis [BR:opi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101521241 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Collagen eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 101521241
NCBI-ProteinID: XP_004589379
LinkDB
Position
7:complement(11898630..11996913)
AA seq 1326 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMHAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDEASEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSAGTPLLAPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLP
RPQDLHGPQPMQRHPGPHGPLGPQGPPGPQGGSGPQGHMGAQGPPGPQGHMGPQGPPGPQ
GHMGPQGPPGTPGLQGPPGPRGMPGPPHPHAMPGGPGPQGIPGPVSQGPLMGLNPRGMQG
PPGPRENQGPAPQGMMMGHPPQELRGPHPPSGLLGHGPQEMRGPQEMRGVQGPPPQGSML
GPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQPNPARGPHPSQGPIPFQQQK
TPLLGDGPRAPFSQDGQSAGPPPLIPGLGQQGAQGRIPPLNPGPGPGPNKGDSRGPPNHH
MGSMAERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFG
HRLREFEGRGGPVPQEEKWRRGGPGPPFPPDPREFSEGDGRSAARGPPGAWEGRRAGDER
FPRDPDDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEESFDVSEEAARGR
DLRGRGRGTPRGGRKGLLPTPDEFPRFEGRKPDSWDGNREPGPGHEHFRDAPRPDHPPHD
GHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHRDMDAPSEDRGSKGRGGPGPSQR
VPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGVRSSSNWGRGSSMNSGPPRRGSSR
GGGRGR
NT seq 3981 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccacatgccaagattccaacaccaa
gcaccacgacagctgttctataagcgacctgattttgcacagcagcaagcaatgcagcag
cttacctttgatggaaaacgaatgagaaaagctgtgaaccgaaagaccatagattacaac
ccttctgtcattaagtatttggagaatagaatatggcaaagagaccagagagatatgcac
gcgattcagcctgatgcaggttactataatgatctagttccacctataggaatgttgaat
aatcctatgaatgctgtaacaacaaaatttgttcggacatcaacaaataaagtgaaatgt
ccagtatttgttgtgaggtggactccagaaggaaggcgattggtcactggagcatccagt
ggagagttcaccttgtggaatggactcactttcaactttgaaacaatcttacaggcccat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgctgacagcagac
catggaggatatgtgaaatactggcagtcgaatatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctt
cgagggcatggtgctgatgtgaagtgtgtcgactggcatccaaccaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcgacacttcacgcccataaaaacacagtcatggaagtgaagctcaacctcaatggc
aactggctgctcacagcatcacgtgaccatctctgtaaactttttgacatccgaaacctg
aaagaagagctgcaagtcttccgaggccataagaaagaagccacagctgtagcctggcat
cctgttcatgaaggactttttgccagtggaggctctgatggttctttgttattctggcat
gttggggtggagaaggaagtgggtgggatggagatggcacatgagggaatgatctggagt
ctggcgtggcatcctcttggacacattctctgctcgggctcaaatgatcacaccagcaaa
ttctggactcgaaatcgaccaggtgacaagatgcgagatcgatacaatctaaatctgtta
cctgggatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccgggaatgggaataccggaacaactaaaattagctatggagcaagaacagatggga
aaagatgaagcaagtgaaatcgaaatgacgattcctgggttggattgggggatggaggaa
gtgatgcaaaaggatcagaagaaagtccctcagaagaaagtcccgtatgcaaaaccgatt
ccagctcagttccagcaggcttggatgcaaaataaagttccaattcctgctccaaacgag
gtgctgaatgatagaaaagaagacattaaattggaagagaagaagaaaacacaagcagaa
attgagcaggagatggctactttacagtacaccaacccccagctcctggagcaactcaaa
attgagagactcgcacagaaacaggctgagcaaattcaacctcctccctcagctgggacc
cctctcctcgcaccccagccctttccaggacaaggtccaatgtcgcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggcgcagatggggcctcca
ggcccacaaggacagtttagacctcctggaccgcagggccccccactgcaccagggaggt
ggggggccacaaggattcatgggaccacaggggccgcagggcccaccccagggactgcca
cggcctcaggacctgcacgggccccagccgatgcagaggcatcctggacctcatggccct
ctggggcctcaaggaccgcctggcccccaggggggttccggccctcaaggtcacatgggt
gctcagggtccgcctggtccacagggtcacatgggcccccaggggcctcctggtccgcag
ggtcacatgggcccccaggggcctcctggtacaccaggtctgcagggcccacctggtccc
agaggaatgccagggccccctcaccctcatgccatgccaggcgggcctgggcctcagggg
atcccgggccccgtgtctcagggacctctgatggggttgaatcccagagggatgcaaggc
cctcctggcccccgggagaaccagggtcctgctccccaaggcatgatgatgggccacccg
cctcaagagctgagaggacctcaccctccaagcggacttcttggacacggccctcaggaa
atgagaggtcctcaggaaatgcggggcgtgcaggggccgccccctcaaggatccatgctg
ggccctccccaggaactgcgtgggccccccggctcacaaggccagcaggggccgccccag
ggctctttgggacctccaccccagggtggcatgcaagggcctcctggacctcagggacag
ccgaacccagcaagagggccacatccttctcaaggtccaataccattccagcaacagaaa
acacctctgctgggtgatgggccccgggcccccttcagtcaggacggccagagtgcaggc
cccccacccctgatcccaggcctagggcagcagggagcacaaggccgcattccccctctg
aaccctggacctggacctggccctaacaaaggtgactcccgcggccccccaaaccatcac
atgggctcgatggcagaaaggcggcatgagcagagcggcggccccgagcacgggcctgag
agggggcctttccggggcggccaggactgcaggggtccccctgataggcgcggccctcac
cccgacttccccgatgacttcagcagaccagacgactttcaccctgacaagcgctttggc
caccggttgcgagaatttgaggggcgaggaggacctgtaccacaagaagagaagtggagg
cgagggggtcccgggcctccgttccctcctgaccccagggaattcagtgagggggacggc
cgcagtgcagcccgaggcccccccggggcgtgggaaggccgcagagctggcgacgagcga
ttcccccgggatcccgacgacccacggtttcgagggcgcagagaagaaagctttcggcga
ggagcccccccaagacatgagggccgcgctccccctagggggagggacagcttccctggc
cctgaagactttggtcctgaggagagttttgatgtatctgaagaagcggctcgaggccgg
gatctccgggggcgaggccggggcaccccacgaggaggaaggaagggtctgctcccgact
cctgacgagttcccgcgctttgaaggacgcaagccggactcctgggatggaaaccgagag
ccagggcctggtcatgaacatttccgtgacgctccccgccctgatcatccccctcatgac
ggtcattccccagccagcagagaacgctcctcttctctccaaggcatggacatggcatcc
ctgccgccccgcaagcgcccttggcacgatgggcctggcacttcagagcaccgagacatg
gacgccccttctgaagaccgaggaagcaaaggccgcgggggcccaggaccttcccagaga
gtgccaaaatccgggcgttccagctctttggatggagaccaccacgatggataccacaga
gatgaaccttttgggggccctccaggcagtggcaccccttctcgaggtgtccggagtagc
agtaactggggtcgaggaagcagcatgaactctggtccgccaaggcgaggctcctcgaga
ggtggagggcggggtcggtag

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