Ochotona princeps (American pika): 101521275
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Entry
101521275 CDS
T07609
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101521275 (RNF13)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101521275 (RNF13)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101521275 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
DUF7027
Prok-RING_4
FeoB_associated
Neur_chan_memb
zf-RING_16
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101521275
NCBI-ProteinID:
XP_004597757
LinkDB
All DBs
Position
14:12754120..12850458
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AA seq
380 aa
AA seq
DB search
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYDFENASQTFDDLPARFGYRLP
TEGLKGFLINSKPENACEPIVPPPLKDNSSSAFIVLIRRFDCNFDIKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIVLVPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ
EENEVSEHTPLLRPLASGSAQSFGALSESRSHQNGTESSDYEEEDNEGSDSSDAENEVNE
HSVVVQLQPNEWDYNIANTV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctccataggaatgctcatgctgtcagccacacaagtctataccatcttgact
gtccagctctttgcgttcttaaaccttttgcctgtagaagcagacattttagcatatgat
tttgaaaatgcatctcagacatttgatgatctcccagcaagatttggttatagacttcca
acagaaggtttaaagggttttttgataaactccaagccagagaatgcctgtgagcccata
gtgcctccaccactgaaggacaattcgtccagcgcgtttattgtgttaattagaagattt
gattgtaattttgatataaaggttttaaatgcccagcgagcagggtacaaagcagccata
gttcacaatgttgattctgacgacctcattagcatgggatccaacgacattgatgtgtta
aagaaaattgacattccatctgtctttattggtgaatcgtcagccaattccctgaaagat
gaatttacatatgaaaaaggaggccacattgtcttggttccagaattcagccttcctctg
gagtactacctgatccccttcctcatcatagtaggcatctgcctcatcctcatcgtcatt
ttcatgattacgaaatttgttcaggacagacatagagccagaagaaacagacttcgtaaa
gatcagcttaagaaactccctatacataaattcaagaaaggagatgagtatgatgtatgt
gctatttgtttagatgaatatgaagatggagacaagctgcgaatccttccctgttcccat
gcttatcactgcaaatgtgtggacccttggctaactaaaaccaaaaaaacctgtccagtg
tgcaagcagaaagttgttccttctcaaggtgactccgattcagacacagacagcagtcaa
gaggaaaacgaggtgtctgagcacacccctttactcagacctctagcttccggcagtgcc
cagtcctttggggcgctgtcggaatcccgctcccatcagaacgggacagagtcttcagac
tacgaggaggaagacaatgaggggagcgacagcagcgacgcggagaacgaggtgaacgag
catagtgttgtggtccagctgcagcctaatgagtgggattacaacatagcgaacactgtt
taa
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