Ochotona princeps (American pika): 101521293
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Entry
101521293 CDS
T07609
Symbol
RNF125
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125
KO
K12170
E3 ubiquitin-protein ligase RNF125 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101521293 (RNF125)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101521293 (RNF125)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101521293 (RNF125)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101521293 (RNF125)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_C2HC_14
zf-Di19
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
TRAF3_RING
Prok-RING_4
zf-Nse
RING_XB3-XBAT31
zf-RING_10
zf-RING_6
zf-rbx1
Sina_RING
Rad50_zn_hook
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101521293
NCBI-ProteinID:
XP_004579625
LinkDB
All DBs
Position
9:complement(34317663..34357219)
Genome browser
AA seq
232 aa
AA seq
DB search
MGSVLSSETGKSAPSSATPRALERKGDPELPLTSFDCSVCLEVLHQPVRTRCGHVFCRSC
IATSLKNNKWTCPYCRAYLPSEGVPATDVAKRMKSEYQNCTECDTLVCLSEMRAHIRMCQ
KYIDKFGPLQELGETATRCVCPFCQRELDEDSLLDHCITHHRSERRPVFCPLCRLIPNEN
ADSFNGSLIRHLQVSHTLFYDDFIDFNIIEEALIRRVLDRSLLEYVNHSSTT
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgtgctgagcagcgaaactggcaagtctgctccttcctctgccaccccacgg
gccctggagcgcaagggggacccggagctgcccctcacttctttcgactgctccgtgtgc
cttgaggtgttgcaccagcctgtccggactcgctgtggccacgtattctgtcgttcctgt
attgctaccagtctaaaaaacaataagtggacctgtccttattgccgggcatatttgcct
tcagaaggagttccagcaactgatgtagccaagagaatgaaatcagaataccagaactgc
accgagtgtgacaccctggtttgcctcagtgagatgagagcacacataaggatgtgtcag
aagtacatcgacaagtttggaccactgcaagaacttggggagacagcaacaaggtgtgta
tgtccattttgtcagagggagttggatgaagacagccttctggatcactgtattactcat
cacagatcagaaaggaggcctgtgttctgtccactctgccgtttaatacctaacgagaat
gcagacagctttaatggcagtttaataagacatttgcaagttagtcacactttgttttat
gatgatttcatagattttaatataattgaagaagctctcattcgaagagtcttggaccgg
tcacttcttgaatatgtgaatcactcaagcaccacgtaa
DBGET
integrated database retrieval system
