KEGG   Ochotona princeps (American pika): 101521384
Entry
101521384         CDS       T07609                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101521384 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:opi03019]
    101521384 (WDR82)
   03036 Chromosome and associated proteins [BR:opi03036]
    101521384 (WDR82)
Messenger RNA biogenesis [BR:opi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101521384 (WDR82)
Chromosome and associated proteins [BR:opi03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     101521384 (WDR82)
    COMPASS/SET1 complex (yeast)
     101521384 (WDR82)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_WDR3_2nd WDR55 EIF3I Beta-prop_WDR36-Utp21_1st DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_IFT140_1st MinC_C Beta-prop_ACSF4 WD_LRWD1
Other DBs
NCBI-GeneID: 101521384
NCBI-ProteinID: XP_012781307
LinkDB
Position
9A:complement(19565117..19612878)
AA seq 264 aa
MESDQPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDGTVRQLPSGAERMATPCSSLETR
VVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSE
MVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVM
HTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQ
FNPKFMTFASACSNMAFWLPTIDD
NT seq 795 nt   +upstreamnt  +downstreamnt
atggagtccgaccaaccaaagagaaccttatacagtaagaagtatggtgtggatctcatc
agatacactcatgcagcaaatactgttgtttacagctcaaacaaaatagatggaacagtg
cgccagctacccagtggggcagagaggatggcgacgccctgctcgtctctggaaaccaga
gtggtagctttgtctatgtcacctgtggatgatactttcatttccgggtctcttgataag
actattcggctttgggatctccggtctcctaactgccagggcctcatgcatctacaaggc
aagccagtttgttcttttgatccagaagggctaatttttgcagcaggtgtcaactctgaa
atggttaaactttatgaccttcgttcttttgataaggggccgttcgcaacttttaagatg
caatacgatcggacttgtgaatggacgggacttaagttcagcaatgatggcaagctcatt
ctcatctccaccaacggcagcttcatccgtctcattgatgcattcaagggagtggtgatg
cacacgtttgggggttatgccaacagcaaagctgtcaccctggaggcttcatttactcct
gactctcagtttattatgattggttcagaggatggcaagattcatgtttggaatggagag
agtggtataaaagtagctgtgttggatggtaaacacacaggccccattacctgtttgcag
ttcaaccccaagttcatgacctttgccagcgcatgttccaacatggctttctggttgcca
accattgatgactga

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