Ochotona princeps (American pika): 101521524
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Entry
101521524 CDS
T07609
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101521524 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101521524 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101521524 (VPS36)
Membrane trafficking [BR:
opi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
101521524 (VPS36)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101521524 (VPS36)
Exosomal proteins of colorectal cancer cells
101521524 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
GRAM
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
101521524
NCBI-ProteinID:
XP_004577556
LinkDB
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Position
8:complement(20024763..20051974)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEMNETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLPQIVFIEEQAAGIGKSAKIVVHLHPAPSSKEPGPFQNSKNSYIKLSFKEHGQIEFHR
RLSEEMIQRRWETMPVSQSLQTSRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLESLKLP
LRLRVFDSGVMVIELQSHKEEEMLASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtatggaccagcggcctcctggagatgaacgagaccctggtgatccag
cagcgcggcgtgcgcatttacgacggcgaggagaagataaaatttgacgccggcaccctg
cttcttagtacacatcgactgatttggagagatcagaaaaatcatgagtgctgcatggcc
attcctcttcctcagattgtgttcattgaggagcaagcagccggcattgggaagagtgcc
aaaatagtggttcatcttcacccagctccttccagcaaagaaccaggcccattccagaac
agcaagaactcctacatcaagctctccttcaaggagcatggtcagattgagtttcacagg
cgtttatcagaagaaatgatacagagaagatgggagactatgcccgtttcccagtcatta
cagacaagtagaggcccccagccaggaagaataagggcagtaggaattgtaggcattgaa
aggaaactggaagaaaaaaggaaagaaactgacaaaaacatttctgaggcttttgaagac
ctcagcaagctaatgatcaaggctaaggaaatggtggagttatcaaaatcaattgctaat
aaaattaaagacaaacaaggtgacatcacagaagatgagaccatcaggtttaaatcctac
ttactgagcatgggaatagctaacccagtgaccagggaaacttacggctctggcacacag
taccacatgcagctggctaaacagctggccgggatactgcaggcacctttggaggaacga
gggggaataatgtcactcacagaggtgtactgcttagtgaaccgggctcgaggaatggaa
ttgctgtcaccagaagatttagtgaatgcctgcaagatgctggaatcactgaaattacct
ctcaggctccgagtttttgacagtggtgtcatggtcatcgagctccagtcccacaaggag
gaggaaatgctggcctcagccctggagacggtctcagaaaagggatccctcacctcagaa
gagtttgctaagctcgtggggatgtctgtgctccttgccaaggaaaggttgctgcttgca
gaaaaaatgggccatctttgccgagatgactcagtggaaggcttgcgattttacccaaat
ttgttcatgactcagagctaa
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