Ochotona princeps (American pika): 101521532
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Entry
101521532 CDS
T07609
Symbol
HLX
Name
(RefSeq) H2.0-like homeobox protein
KO
K09339
homeobox protein HLX1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101521532 (HLX)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
101521532 (HLX)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101521532
NCBI-ProteinID:
XP_004578964
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Position
16:29494381..29499151
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AA seq
490 aa
AA seq
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MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFALDPGAGKKPSFCIADILHAGVGEPGAA
PEGLVGASAAALTAHLGSVHPHASFQAATRSPLRPTPVVAPSEVAAGFPQRLSPLSAAYH
HHHPQPQQPQQQPQQPPPPPPPPQPRSGSLQPLVSGTRGAPNSHHHSGSAPAPSSKDLKF
GIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSTGQFFASLDPINEASAI
LSPLSSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFE
IQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEVGEKPAGGAS
AADGEQDERSPSRSEGEAESESSDSESLDMAPSDTERTEGAERTLHQTTVIKTSAAGALV
PPSSSGGAGGGGSFSFGSAGGLSSNNSSGSASNLGCNGAPELLAAPQPATVSGAPQSPEP
AANPAGRLID
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggccgggctggcccctttctacgcctccaacttcagcctctggtcggctgct
tactgctcctcggccggtccgggcggctgctcttttgccttggacccaggcgccgggaag
aagccatccttctgcatcgcagatatcctgcacgccggggtcggggagccaggggcggct
cccgagggcctggtgggcgcctcggccgccgccctcaccgcgcacttgggttccgttcac
ccgcacgcctctttccaagctgccaccaggtccccgcttcgacccacgcccgtggtggcg
ccctcggaggtcgcagctggcttcccgcagcggctgtccccgctctccgccgcctaccac
caccaccacccgcagccacagcagccgcagcagcagccgcaacagccgcccccaccgcca
ccaccaccgcaaccccgctctggctccttgcagcccctggtctccggcactagaggggcc
ccgaactcgcaccaccacagcggctcggccccggccccttccagcaaagacctcaaattt
ggaattgaccgtattttgtctgcagaatttgaccccaaagtcaaggaaggcaacacgttg
agagatctcacatccctgctgacgggagggcggcccgctggggtgcacctttcgggcctg
cagccctccacaggccaattcttcgcatcccttgatcccattaacgaggcatccgccatc
ctgagccccttgagctccaacccgagaaactccgttcagcatcagttccaagatacgttt
ccaggtccctatgctgtgctcaccaaggacaccatgcctcagacatacaagaggaagcgc
tcgtggtcgcgcgccgtcttctccaacctgcaaaggaaaggcctggagaaaaggtttgag
atccagaaatacgtgacgaagccagaccgaaagcagctggcggccatgctgggcctcacc
gacgcccaggtcaaggtgtggttccagaaccggagaatgaagtggcgacactccaaggag
gcccaggcccagaaagacaaggacaaggaggtgggtgagaagcctgcgggcggagcctcg
gctgcagatggagagcaggacgagaggagccctagccgctcggaaggcgaggcggagagc
gagagcagcgactccgagtcgctggacatggcccccagcgacacagagcggaccgagggg
gcagagcgtactctgcaccaaacaaccgttatcaagacgtcggccgcaggcgccctcgtc
ccgcccagcagcagcggcggcgctggaggtggcggcagttttagcttcggcagcgccggc
ggtctcagcagcaacaacagctcggggagcgccagcaatcttggctgcaacggcgcccca
gaattgctcgctgcgccccagcctgccacagtcagtggtgctccccaaagccccgagccg
gccgcaaaccccgctgggaggcttatagactag
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