Ochotona princeps (American pika): 101521651
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Entry
101521651 CDS
T07609
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
101521651 (TTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101521651 (TTF1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
101521651 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
DUF6848
DUF722
Motif
Other DBs
NCBI-GeneID:
101521651
NCBI-ProteinID:
XP_004593732
LinkDB
All DBs
Position
1A:739612..762692
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AA seq
761 aa
AA seq
DB search
MEEESNRFEILTPLLDKKKKKKKRSASKERHRKHSQERLRDSSLVREQPEATPSKRKKKK
ASQQPRSSPLKQFPIWGDPEEATSIPKKHKKKTKQELEVEEEAVPVYALVDKENIESTPR
NCRGDYAAYVEKNKARKSKKGHHAGVLGAAPESAEEESALRPTVSRKKHREQPGKAARRD
AAQESWPAGPAPAHTGTEEQECLPSTELPGSAGKRRSKKKKKKKHRSQEVETLAAPESPG
AASPESPQRVDKAGTVQSGESGDAPEEARDPSRAKKKSKKRKHASVTREAAAGDTSEPPE
PDSPPVRGGVKRRLHDELAQAPPRRQRMEEAPRVEPTSEEEEDLWGLADDPETSCSARAW
RDSPDPEVDLDHAVKELREFIPDIGHRAAASVKRMYREDLQRFREFRAQGVPIRFGKFSA
KENKQLEKNVEEFLALTGIESADKLLYTDRYPEEKLRITNLKRKYAFRVHIGKGIARPWK
LVYYRAKKMFDVNNYKGRYSTGDIEKLKRYQFLHGNNWKKIGELVSRSSLSVALKFSQIS
SRINHGAWSKTETQKLIKAVKEVILKKISLEELQEVDSRLQENPEQRLEIVREKLYKGIS
WVEVAAKVESRNWMQCKSKWTDILTKRMNYGEDVYRGVNALQAKINLIERLYEINVEDSN
EIDWEDLASAIGDVPPSFVQTKFYRLKATCVPFWQRKTFPEIIDYLYETSLPLLKGKLEK
TLARTGSEVQPPVTPRPAFLFQDIFYCDDEDSEDEDPEERV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaatccaacagatttgaaatccttactccgcttcttgacaagaaaaagaag
aagaaaaagcgctccgcctctaaggagagacaccggaagcactcccaggagcggctccgg
gattcgtccctggtgagggagcagcccgaggcgaccccaagcaagaggaagaagaagaag
gcttcacagcagcccaggtcttccccattgaaacagttcccaatctggggtgaccctgaa
gaggccacttctatacccaaaaaacacaagaagaaaacaaagcaagagttagaggtagaa
gaggaggcagttcctgtgtacgcccttgtggacaaagaaaatatcgagagcacacccagg
aactgcaggggagactatgctgcttatgttgagaagaacaaggcgagaaagtccaagaag
ggacaccacgcaggggtactgggcgcagcccctgagtccgccgaggaggagtcggcgctg
cgtcccacggtgagcaggaagaagcacagagagcagcccgggaaggccgcgcgccgtgac
gctgcccaggagagctggcccgccggccctgccccagcccacacggggacagaggagcag
gagtgtctgccttccacagagctgccgggctctgcgggcaagcgccggtccaagaagaaa
aagaaaaagaagcataggagccaagaggtggagacactggcggcgcctgagagtcccggg
gctgcatcccccgaaagtccccaaagggtcgacaaggctgggacagtacagagtggggaa
agtggggatgcgcctgaagaggcccgggaccccagcagggcaaagaaaaagtccaagaaa
aggaagcacgcttccgtgacaagagaggcagcagctggtgacacctctgagccccccgaa
cctgacagccccccggtaagaggtggtgtgaaacgcaggctgcacgatgagctcgcccag
gcccctcccagaaggcagcgtatggaagaagcgcccagggtagaacccaccagcgaagag
gaagaagacctgtgggggctggcagacgaccctgagaccagctgctcagccagagcttgg
agggactcccctgaccccgaggtggatctggaccacgccgtgaaggagctgcgagagttc
atccccgacattgggcacagggcagccgcaagcgtgaagcgcatgtatcgggaagacctg
cagcgcttccgggagttcagagcccagggtgtccctatcagatttggcaagttttctgcc
aaggaaaataagcagctggagaagaacgtggaggagtttctggccctgacggggatcgag
agtgcagacaaactgctgtacacagacagatatccggaggagaagcttaggatcaccaat
ctaaaaagaaaatacgcattccgggtacacattggaaagggcattgcacggccctggaag
ctcgtctactaccgcgccaagaagatgttcgatgtgaacaattacaaaggcaggtacagc
acaggagacattgagaagttgaagagataccagtttctgcatggaaacaactggaagaag
attggcgagttggtgtcacggagcagcctctccgtggccctgaagttctcgcagatcagc
agccgaataaatcacggcgcttggagtaagacagaaacccagaagctgatcaaggccgtc
aaagaagtgattctaaagaaaatatctctcgaggagttgcaagaggtagattccagactc
caggagaaccctgaacagcgcctggagattgttcgggaaaagctctacaaaggcatatcc
tgggtagaagtggcagccaaggtggagagcagaaactggatgcagtgcaaaagtaagtgg
actgacatcctgaccaagaggatgaattacggcgaggacgtgtaccgcggcgtgaacgcc
ctgcaggcgaagatcaacctgattgagagattgtatgaaatcaatgtggaagattcgaat
gaaatagactgggaagatcttgctagtgccatcggggatgttcctccatctttcgtccaa
actaaattctacaggctgaaggctacctgtgttcccttttggcaaaggaagacttttccg
gaaatcatcgactacctgtacgagaccagcctgcctctgcttaaaggaaagctggagaag
acactggccagaacgggcagtgaggtgcagccccccgtgacccctaggccggccttcctg
ttccaggacattttctactgtgacgacgaggacagtgaggacgaagacccggaagagcgg
gtgtga
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