Ochotona princeps (American pika): 101521687
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Entry
101521687 CDS
T07609
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1 isoform X1
KO
K09326
homeobox protein OTX1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101521687 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101521687 (OTX1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
101521687 (OTX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
101521687
NCBI-ProteinID:
XP_004580165
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Position
2:complement(46645680..46651466)
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AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAVAGLGGNPAVAVASSLSTPAASSIWSP
ASISPGSAPASVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYSQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatatggcatgaacgggttgggcctggccgggcct
gccatggatctcctgcatccctccgtgggctacccggccaccccacgcaagcagcggagg
gagcgcaccactttcacacgctcacagctggacgtgctggaggcactcttcgcaaagact
cgctaccccgacatctttatgcgtgaggaggtggcgctcaagatcaacctgcccgagtcc
agagtccaggtttggtttaagaaccgccgcgccaaatgccgccagcagcagcagagcggg
agcggaaccaagagccgccccgtcaagaagaagtcttcccctgtgagggagagctcgggc
tcggaaagcagcgggcagttcacaccgccggctgtgtccagctccgcctcgtcctcgagc
tcagcctccagcgcctccgccaaccccgcggctgcggctgttgcaggcctgggtgggaac
ccggcggtagccgtcgcgtcgtcgctcagtacgccggccgcctcgtccatttggagccca
gcctccatctcacccggctcagcgcccgcgtccgtgtcagtgccggagccgctggcggcg
cccagcaacgcctcgtgtatgcagcgctccgtagctgcaggcgccgccaccgcagcagcc
tcctaccccatgtcctacagccagggcggcagctacggccagggctaccccgcgccctcc
tcctcctattttggcggtgtggactgcagctcctacctagcacccatgcattcgcatcac
cacccgcaccagctcagtcccatggcgccctcctccatggcgggtcatcaccatcaccac
ccgcacgctcaccaccctttgagccagtcctcaggccaccaccaccaccaccatcaccac
caccaccagggctacggtggctccggtcttgccttcaactctgccgactgcttggattac
aaggagcctggtgccgcggctgcttcttctgcttggaaactcaacttcaactcccccgac
tgtctggactataaggaccaagcctcgtggcggttccaggtcttgtga
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